Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
- mitochondrion 2
- cytosol 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g050760.1.1 | Tomato | cytosol | 69.44 | 65.22 |
| CDX73898 | Canola | extracellular | 54.63 | 56.73 |
| CDY00710 | Canola | extracellular | 53.7 | 55.77 |
| Bra034157.1-P | Field mustard | extracellular | 52.78 | 54.81 |
| AT3G10985.1 | Thale cress | plastid | 51.85 | 50.91 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 45.37 | 50.52 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 46.3 | 49.51 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 45.37 | 48.51 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 89.81 | 45.54 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 50.0 | 45.38 |
| GSMUA_Achr10P... | Banana | cytosol | 43.52 | 43.12 |
| Zm00001d038029_P001 | Maize | mitochondrion | 43.52 | 41.96 |
| Os07t0691300-01 | Rice | mitochondrion | 36.11 | 39.39 |
| KRG97665 | Soybean | cytosol | 57.41 | 39.24 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 45.37 | 36.3 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 46.3 | 36.23 |
| KRH31209 | Soybean | cytosol | 57.41 | 36.05 |
| CDY00985 | Canola | cytosol | 53.7 | 33.92 |
| Bra029887.1-P | Field mustard | cytosol | 53.7 | 30.85 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 48.15 | 28.42 |
| CDY08559 | Canola | cytosol, plasma membrane | 53.7 | 28.16 |
| HORVU2Hr1G015360.4 | Barley | cytosol | 46.3 | 27.62 |
| Solyc09g014940.1.1 | Tomato | cytosol | 38.89 | 25.61 |
| Zm00001d047696_P001 | Maize | cytosol | 43.52 | 23.15 |
| Os03t0299600-01 | Rice | mitochondrion | 47.22 | 22.37 |
| Os05t0342000-00 | Rice | cytosol, plastid | 40.74 | 21.57 |
| HORVU2Hr1G015410.2 | Barley | cytosol | 37.96 | 21.24 |
| KXG37021 | Sorghum | cytosol | 39.81 | 20.28 |
| Zm00001d022569_P001 | Maize | cytosol | 41.67 | 18.52 |
| TraesCS4D01G189800.1 | Wheat | plastid | 46.3 | 18.45 |
| OQU92745 | Sorghum | plastid | 44.44 | 18.39 |
| EES19325 | Sorghum | cytosol | 41.67 | 18.22 |
| Zm00001d028808_P001 | Maize | plastid | 43.52 | 17.94 |
| OQU92744 | Sorghum | cytosol | 44.44 | 15.95 |
Protein Annotations
| EnsemblPlants:Solyc06g048820.1.1 | EnsemblPlantsGene:Solyc06g048820.1 | InterPro:NTF2-like_dom_sf | InterPro:Wound-induced_1/12_sub | InterPro:Wun1-like | PANTHER:PTHR33703 |
| PANTHER:PTHR33703:SF11 | PFAM:PF07107 | PIRSF:PIRSF007948 | SUPFAM:SSF54427 | UniParc:UPI000276673A | UniProt:K4C5C8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:31789821..31790147
Molecular Weight (calculated)
11995.4 Da
IEP (calculated)
8.784
GRAVY (calculated)
0.069
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MQILTGTAKF DNASFQFLHK TIDVFGSVVL VEGCDPTRSI TWVHAWTVTD GVITQVREYF NTSLTVTRFR KKNQSDISSI TPLHCPSVWE SSLPNRVGKS
101: VPGLVLAL
101: VPGLVLAL
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Arabidopsis Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.