Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- mitochondrion 1
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73898 | Canola | extracellular | 74.55 | 78.85 |
| CDY00710 | Canola | extracellular | 74.55 | 78.85 |
| Bra034157.1-P | Field mustard | extracellular | 73.64 | 77.88 |
| PGSC0003DMT400046104 | Potato | cytosol | 57.27 | 56.25 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 50.91 | 55.45 |
| Solyc06g050760.1.1 | Tomato | cytosol | 56.36 | 53.91 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 46.36 | 52.58 |
| Solyc06g048820.1.1 | Tomato | cytosol | 50.91 | 51.85 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 44.55 | 48.51 |
| GSMUA_Achr10P... | Banana | cytosol | 47.27 | 47.71 |
| CDY00985 | Canola | cytosol | 71.82 | 46.2 |
| Os07t0691300-01 | Rice | mitochondrion | 40.0 | 44.44 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 47.27 | 43.7 |
| Zm00001d038029_P001 | Maize | mitochondrion | 43.64 | 42.86 |
| Bra029887.1-P | Field mustard | cytosol | 70.0 | 40.96 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 48.18 | 39.26 |
| KRG97665 | Soybean | cytosol | 55.45 | 38.61 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 48.18 | 38.41 |
| CDY08559 | Canola | cytosol, plasma membrane | 70.0 | 37.38 |
| KRH31209 | Soybean | cytosol | 54.55 | 34.88 |
| HORVU2Hr1G015360.4 | Barley | cytosol | 49.09 | 29.83 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 46.36 | 27.87 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 50.91 | 26.29 |
| AT5G01740.1 | Thale cress | cytosol | 38.18 | 25.93 |
| HORVU2Hr1G015410.2 | Barley | cytosol | 43.64 | 24.87 |
| Zm00001d047696_P001 | Maize | cytosol | 45.45 | 24.63 |
| Os03t0299600-01 | Rice | mitochondrion | 50.0 | 24.12 |
| Os05t0342000-00 | Rice | cytosol, plastid | 43.64 | 23.53 |
| KXG37021 | Sorghum | cytosol | 43.64 | 22.64 |
| TraesCS4D01G189800.1 | Wheat | plastid | 50.0 | 20.3 |
| OQU92745 | Sorghum | plastid | 45.45 | 19.16 |
| EES19325 | Sorghum | cytosol | 42.73 | 19.03 |
| Zm00001d028808_P001 | Maize | plastid | 44.55 | 18.7 |
| Zm00001d022569_P001 | Maize | cytosol | 40.0 | 18.11 |
| OQU92744 | Sorghum | cytosol | 45.45 | 16.61 |
Protein Annotations
| EntrezGene:2745879 | MapMan:35.1 | UniProt:A0A178V9X9 | ProteinID:AAF01523.1 | ProteinID:AEE74988.1 | ArrayExpress:AT3G10985 |
| EnsemblPlantsGene:AT3G10985 | RefSeq:AT3G10985 | TAIR:AT3G10985 | RefSeq:AT3G10985-TAIR-G | EnsemblPlants:AT3G10985.1 | TAIR:AT3G10985.1 |
| EMBL:AY045972 | EMBL:AY088170 | EMBL:AY091355 | EMBL:BT000768 | GO:GO:0002238 | GO:GO:0003674 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0007568 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009620 | GO:GO:0009624 | GO:GO:0010150 | GO:GO:0010193 | RefSeq:NP_974279.1 | InterPro:NTF2-like_dom_sf |
| ProteinID:OAP03137.1 | PFAM:PF07107 | PIRSF:PIRSF007948 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33703 | PANTHER:PTHR33703:SF11 | UniProt:Q94AK6 |
| Symbol:SAG20 | SUPFAM:SSF54427 | UniParc:UPI00000AC4C2 | InterPro:Wound-induced_1/12_sub | InterPro:Wun1-like | SEG:seg |
Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
Coordinates
chr3:+:3442237..3443680
Molecular Weight (calculated)
11464.6 Da
IEP (calculated)
8.244
GRAVY (calculated)
0.332
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.