CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10985.1	EES01073	AT2G42580.1	19000166
AT3G10985.1	EES02247	AT2G42580.1	19000166
AT3G10985.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047696_P001	Maize	cytosol	47.51	70.44
OQU92745	Sorghum	plastid	59.14	68.2
TraesCS4A01G115600.1	Wheat	mitochondrion	27.24	60.74
TraesCS4B01G188400.1	Wheat	cytosol	36.54	60.11
HORVU4Hr1G054970.1	Barley	cytosol	27.24	59.42
Zm00001d028808_P001	Maize	plastid	50.17	57.63
Os03t0299600-01	Rice	mitochondrion	43.19	57.02
GSMUA_Achr10P...	Banana	cytosol	19.93	55.05
KXG37021	Sorghum	cytosol	36.88	52.36
KRG97665	Soybean	cytosol	26.91	51.27
GSMUA_Achr6P15760_001	Banana	cytosol	19.93	50.42
CDY00710	Canola	extracellular	17.28	50.0
CDX73898	Canola	extracellular	17.28	50.0
Bra034157.1-P	Field mustard	extracellular	17.28	50.0
Solyc06g050760.1.1	Tomato	cytosol	18.94	49.57
TraesCS4D01G189800.1	Wheat	plastid	43.85	48.71
PGSC0003DMT400046104	Potato	cytosol	17.94	48.21
KRH31209	Soybean	cytosol	27.24	47.67
AT3G10985.1	Thale cress	plastid	16.61	45.45
CDY00985	Canola	cytosol	25.25	44.44
Solyc06g048820.1.1	Tomato	cytosol	15.95	44.44
KRH30153	Soybean	cytosol	21.59	44.22
KRH17129	Soybean	cytosol	22.26	41.88
KRG98193	Soybean	cytosol	22.59	41.72
Bra029887.1-P	Field mustard	cytosol	25.25	40.43
CDY08559	Canola	cytosol, plasma membrane	25.25	36.89
VIT_06s0004g07550.t01	Wine grape	extracellular, vacuole	26.91	36.32
EES19325	Sorghum	cytosol	28.57	34.82
PGSC0003DMT400017004	Potato	extracellular, plasma membrane, plastid	24.58	34.74

Protein Annotations

EnsemblPlants:OQU92744	EnsemblPlantsGene:SORBI_3001G401900	Gene3D:3.10.450.50	InterPro:NTF2-like_dom_sf	InterPro:Wun1-like	PANTHER:PTHR33703
PANTHER:PTHR33703:SF4	PFAM:PF07107	ProteinID:OQU92744	ProteinID:OQU92744.1	SEG:seg	SUPFAM:SSF54427
UniParc:UPI000B8BAC25	UniProt:A0A1Z5S9X9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:68736151..68738584

Molecular Weight (calculated)

32139.7 Da

IEP (calculated)

8.359

GRAVY (calculated)

-0.362

Length

301 amino acids

Sequence
(BLAST)

001: METIRAVTTD NAHVCCHAHA ATWEKVARVA VVAERQCSRT LTPRPIPHGS VPGAESRSSS TVSLSLERSG ERIGSDRIGE PTTRQELAIP RGQGAAASPR
101: PHETAELDAA AAFAGGESAE QRNRFLVLRL YEALNARDAR RAQELLAPDL EWWFHGPPTR QHMMRLLTGA DQRDKQNRGG GGGFVFSPRS VDAFGSTVIA
201: EGADDARQLY WVHAWTVGPD GVITQLREYF NTDLTVTLLS GSGAVSSTKK ADIAGALPKL QDAASSSSSS SPSAAAGPKC LWQSRRADSA HKSLPGLVLA
301: I

Best Arabidopsis Sequence Match ( AT5G01740.1 )
(BLAST)

001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI

Arabidopsis Description

AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.