CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91475
EER93429
EER97483
EER98775
EER99646
EES00150
EES01469
EES02048
EES02279
EES02280
EES03170
EES03353
EES03565
EES07070
EES10764
EES12351
EES13089
EES13145
EES14146
EES15140
EES15248
EES16521
EES17613
EES18282
EES18539
EES19164
EES19325
EES19686
EES19704
EES19824
KXG20416
KXG21798
KXG21918
KXG22316
KXG22390
KXG22914
KXG26730
KXG27695
KXG27836
KXG28492
KXG29763
KXG35044
KXG37021
KXG38192
KXG39903
KXG40264
OQU78568
OQU80949
OQU82741
OQU84170
OQU84933
OQU86165
OQU89687
OQU92006
OQU92744
OQU92745

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42580.1	EER97483	AT1G26650.1	19000166
AT2G42580.1	KXG40264	AT1G42970.1	19000166
AT2G42580.1	EER98775	AT1G53400.1	19000166
AT2G42580.1	EES03565	AT1G53400.1	19000166
AT2G42580.1	KXG22390	AT1G53400.1	19000166
AT2G42580.1	EER99646	AT1G69420.1	19000166
AT2G42580.1	KXG39903	AT1G69420.1	19000166
AT2G42580.1	EES07070	AT1G74050.1	19000166
AT2G42580.1	EES12351	AT1G74050.1	19000166
AT2G42580.1	EES13089	AT1G75750.1	19000166
AT2G42580.1	EES18282	AT1G75750.1	19000166
AT2G42580.1	KXG21918	AT1G75750.1	19000166
AT2G42580.1	EES13145	AT1G76920.1	19000166
AT2G42580.1	EES03353	AT1G80300.1	19000166
AT2G42580.1	KXG29763	AT1G80300.1	19000166
AT2G42580.1	OQU92006	AT2G01950.1	19000166
AT2G42580.1	EES01469	AT2G20670.1	19000166
AT2G42580.1	EES19824	AT2G20670.1	19000166
AT2G42580.1	EES10764	AT2G27330.1	19000166
AT2G42580.1	KXG22914	AT2G30520.1	19000166
AT2G42580.1	OQU82741	AT2G30520.1	19000166
AT2G42580.1	EES02048	AT2G41410.1	19000166
AT2G42580.1	EES16521	AT2G41410.1	19000166
AT2G42580.1	KXG27695	AT2G41410.1	19000166
AT2G42580.1	EES03170	AT3G02740.1	19000166
AT2G42580.1	EES14146	AT3G02740.1	19000166
AT2G42580.1	OQU84933	AT3G02740.1	19000166
AT2G42580.1	EES19686	AT3G10980.1	19000166
AT2G42580.1	OQU78568	AT3G10980.1	19000166
AT2G42580.1	EES19325	AT3G10985.1	19000166
AT2G42580.1	KXG37021	AT3G10985.1	19000166
AT2G42580.1	OQU92744	AT3G10985.1	19000166
AT2G42580.1	OQU92745	AT3G10985.1	19000166
AT2G42580.1	OQU80949	AT3G12630.1	19000166
AT2G42580.1	OQU89687	AT3G12630.1	19000166
AT2G42580.1	KXG22316	AT3G14400.1	19000166
AT2G42580.1	KXG28492	AT3G16640.1	19000166
AT2G42580.1	OQU84170	AT3G16640.1	19000166
AT2G42580.1	EER93429	AT3G24830.1	19000166
AT2G42580.1	EES17613	AT3G24830.1	19000166
AT2G42580.1	EES15140	AT3G52300.1	19000166
AT2G42580.1	KXG35044	AT3G52300.1	19000166
AT2G42580.1	EES15248	AT3G62120.1	19000166
AT2G42580.1	EES19704	AT3G62120.1	19000166
AT2G42580.1	EES02279	AT4G14440.1	19000166
AT2G42580.1	EES02280	AT4G14440.1	19000166
AT2G42580.1	EES18539	AT4G14440.1	19000166
AT2G42580.1	KXG38192	AT4G39050.1	21798944
AT2G42580.1	EER91475	AT5G03230.1	19000166
AT2G42580.1	KXG26730	AT5G03230.1	19000166
AT2G42580.1	EES00150	AT5G11670.1	19000166
AT2G42580.1	EES19164	AT5G11670.1	19000166
AT2G42580.1	KXG21798	AT5G11670.1	19000166
AT2G42580.1	OQU86165	AT5G11670.1	19000166
AT2G42580.1	KXG20416	AT5G38530.1	19000166
AT2G42580.1	KXG27836	AT5G42440.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G437100.1	Wheat	nucleus	79.71	79.94
HORVU1Hr1G093390.2	Barley	cytosol	76.86	79.94
TraesCS1A01G427400.1	Wheat	cytosol	79.43	79.77
TraesCS1B01G462300.1	Wheat	cytosol	78.71	79.39
Os05t0587300-01	Rice	cytosol	61.57	77.66
EES01073	Sorghum	cytosol	71.43	73.42
GSMUA_Achr7P24480_001	Banana	cytosol	55.0	59.32
GSMUA_Achr4P08560_001	Banana	cytosol	57.57	58.83
VIT_18s0001g09830.t01	Wine grape	cytosol	21.43	56.82
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	40.14	55.86
GSMUA_Achr3P25160_001	Banana	cytosol	56.71	55.76
EES02247	Sorghum	plastid	54.43	55.7
Zm00001d009724_P009	Maize	cytosol	84.0	55.0
VIT_12s0028g02240.t01	Wine grape	cytosol	53.14	52.39
VIT_19s0014g01470.t01	Wine grape	cytosol	51.86	52.38
Bra038116.1-P	Field mustard	cytosol	49.0	52.13
CDY25865	Canola	cytosol	49.0	52.13
KRH55099	Soybean	nucleus	50.0	51.62
KRH22291	Soybean	plastid	43.0	51.54
KRH26223	Soybean	nucleus	49.71	51.48
CDY45930	Canola	cytosol	48.43	51.44
CDY25722	Canola	cytosol, plastid	48.86	51.27
Bra030946.1-P	Field mustard	cytosol, plastid	48.86	51.04
CDY02514	Canola	cytosol, plastid	48.86	51.04
KRH27330	Soybean	cytosol	50.86	51.0
KRH21985	Soybean	cytosol	50.29	50.87
GSMUA_AchrUn_...	Banana	cytosol	19.29	50.37
PGSC0003DMT400032362	Potato	cytosol	50.0	50.0
Solyc07g062580.2.1	Tomato	cytosol	50.0	49.93
AT1G53300.1	Thale cress	cytosol	48.71	48.78
AT3G58620.1	Thale cress	cytosol	46.86	48.09
PGSC0003DMT400054803	Potato	cytosol	20.0	47.62
Bra000267.1-P	Field mustard	cytosol	45.43	47.32
CDY61202	Canola	cytosol	45.29	47.24
Bra007405.1-P	Field mustard	cytosol	44.86	46.66
CDY49237	Canola	cytosol	44.43	46.63
CDX71941	Canola	cytosol	44.71	46.44
CDY34224	Canola	cytosol	4.57	46.38
CDY42827	Canola	cytosol	44.29	46.2
CDY55390	Canola	cytosol	44.14	46.19
CDY51514	Canola	cytosol	44.14	46.19
AT2G42580.1	Thale cress	cytosol	45.57	46.16
Bra023795.1-P	Field mustard	cytosol	5.71	45.45
Bra004709.1-P	Field mustard	cytosol	42.57	45.36
KRH27037	Soybean	nucleus	42.86	44.44
PGSC0003DMT400054902	Potato	cytosol	18.29	42.81
Solyc10g007240.1.1	Tomato	cytosol	35.43	41.75
PGSC0003DMT400054904	Potato	cytosol	36.0	41.72
PGSC0003DMT400054911	Potato	cytosol	30.43	40.88
PGSC0003DMT400054796	Potato	cytosol, plastid	35.86	40.81
AT3G14950.1	Thale cress	cytosol	42.43	40.68
Solyc10g007230.1.1	Tomato	cytosol	34.57	40.6
Solyc10g007220.1.1	Tomato	cytosol	28.71	39.8
PGSC0003DMT400054909	Potato	cytosol	22.71	38.59
Solyc10g007420.2.1	Tomato	cytosol	23.43	38.59
Bra027292.1-P	Field mustard	cytosol	40.43	38.56
CDX98517	Canola	cytosol	39.71	38.4
CDX97619	Canola	cytosol	39.71	38.34
CDY20095	Canola	nucleus	39.43	37.91
CDY32327	Canola	cytosol	39.14	37.59
Solyc10g007250.1.1	Tomato	cytosol	14.86	37.28
CDY34222	Canola	cytosol	16.29	37.01
Bra021583.1-P	Field mustard	nucleus	39.43	36.51
CDY40820	Canola	mitochondrion	14.57	36.3
PGSC0003DMT400091014	Potato	nucleus	30.43	35.09
Solyc10g007430.1.1	Tomato	cytosol, plastid	18.71	34.66
CDY34223	Canola	cytosol	15.71	33.74
Bra023793.1-P	Field mustard	cytosol	19.71	33.5
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	15.29	32.82
KXG30730	Sorghum	cytosol, plastid	27.14	32.2
KXG33951	Sorghum	cytosol	10.0	27.67

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EntrezGene:8066542	UniProt:A0A1Z5R505	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987
GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734
EnsemblPlants:OQU78515	ProteinID:OQU78515	ProteinID:OQU78515.1	PFAM:PF00085	PFAM:PF00515	PFAM:PF13414
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF395	SMART:SM00028	EnsemblPlantsGene:SORBI_3009G251100
SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A893C3	RefSeq:XP_002441602.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:58602779..58605953

Molecular Weight (calculated)

73742.3 Da

IEP (calculated)

8.873

GRAVY (calculated)

-0.275

Length

700 amino acids

Sequence
(BLAST)

001: MAEADRDRMR LRAAALTLHD AGARDKPDRK ADVFADLGSP VSPLRLRPAA ATPSSSSSSA GSAKSPAPGN AAMGRGARGS HSGELAPETT NPPRPPGHRR
101: SGSGPLIFSG ASSSAGSVGG GGGGGGSGSG STASSPLTNA LPTGNICPSG RVAGAAAAAT QPPRARPVVL GSGTGHYGHG SIMRGGGAAP ARTSVDAAPL
201: LHSNNSSRSP ASCPAPPATS GGLQEITRAG NEWYKKGRYA EALRHYDRAV GLCPDSAACR CNRAAALIGL GRLAEAFREC EEAVRLDPAS GRAHGRLAGL
301: CLRLGMIEKA RTHFTLAGSV NQSDPVEWQK LHEVEIHQGR CMDARKIGDW KSALREADAA IAIGADSSRL LLALRSEALL RLHKLEEADS TITSLLKLDN
401: ASLPSTPTKV SGMSADSYVH IVQAQVNMAF GRFDSAVALS EKAKLIDRVS SEVEVILNNV RLVATARAQG NDLFKAGKFA EASVAYGEGL KYEPSNPVLY
501: CNRAACWSKL GRWAQAVEDC NEALGVQPNY TKALLRRAAS YAKLERWADC VRDYEVLRKD LPGDTEVAES LFHAQVALKT ARGEEVSNMK FGGGVEEITS
601: LEQLQDAIHS PGVSVLYFMA TSNKQCAQIT PSVDSLCSEC PAVNFLKVNV DESPQLARAE NVRVVPSFKI YKDGTRVKEM ICPSLQVLRY SVRHYAVSSS

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.