CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41410.1	EES01073	AT2G42580.1	19000166
AT2G41410.1	EES02247	AT2G42580.1	19000166
AT2G41410.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004972_P001	Maize	plastid	77.16	81.28
TraesCS5B01G134200.1	Wheat	cytosol	37.06	81.11
TraesCS5D01G141900.1	Wheat	plastid	62.94	67.76
HORVU5Hr1G043460.1	Barley	plastid	60.91	65.57
Os11t0141400-01	Rice	cytosol	62.44	65.43
EES16521	Sorghum	plastid	60.41	55.61
Os12t0138050-00	Rice	plastid	63.96	52.94
EES02048	Sorghum	plastid	44.16	45.55
Bra016936.1-P	Field mustard	cytosol	23.35	43.81
AT3G10190.1	Thale cress	cytosol, mitochondrion	37.56	35.41
KRH66816	Soybean	plastid	38.07	34.25
KRG95139	Soybean	plastid	37.06	33.49
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	36.04	33.33
CDX79938	Canola	cytosol, mitochondrion, plastid	36.04	33.33
CDY23852	Canola	cytosol, mitochondrion, plastid	35.53	32.86
CDY06925	Canola	cytosol, mitochondrion, plastid	36.04	32.72
CDY14768	Canola	cytosol, mitochondrion, plastid	36.04	32.72
CDY60169	Canola	cytosol, plastid	34.52	32.69
Bra029821.1-P	Field mustard	plastid	34.52	32.69
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	36.55	32.43
Solyc10g079420.1.1	Tomato	nucleus, plastid	33.5	32.2
PGSC0003DMT400076709	Potato	mitochondrion	34.01	31.75
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	32.99	31.71
CDY00910	Canola	cytosol, plastid	34.52	31.19
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	34.01	31.02
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	43.65	29.86
EES19251	Sorghum	cytosol	26.9	29.61
EES04217	Sorghum	cytosol, mitochondrion, plastid	26.9	28.04
OQU78964	Sorghum	cytosol	23.35	27.88
Solyc04g018110.1.1	Tomato	plastid	33.5	27.27
EER96860	Sorghum	cytosol, mitochondrion	25.38	27.17
PGSC0003DMT400027581	Potato	cytosol, plastid	29.44	26.85
EER97743	Sorghum	plastid	26.9	26.63
EER92319	Sorghum	cytosol	24.37	25.53
EES00360	Sorghum	cytosol	25.89	24.76
KXG39446	Sorghum	plastid	23.35	24.08
EER87935	Sorghum	endoplasmic reticulum, vacuole	29.44	23.67
EES19444	Sorghum	plastid	23.86	23.62
EES11048	Sorghum	plastid	26.9	22.27

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A1B6PPU8	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KXG27695	ProteinID:KXG27695
ProteinID:KXG27695.1	ProteinID:OQU82842.1	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	SMART:SM00054	EnsemblPlantsGene:SORBI_3005G029200	SUPFAM:SSF47473	UniParc:UPI0003C72401	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:2599446..2600994

Molecular Weight (calculated)

20439.9 Da

IEP (calculated)

4.358

GRAVY (calculated)

-0.161

Length

197 amino acids

Sequence
(BLAST)

001: MKLSMPFFSS SSSSGKKQQE TTTIISKKRT KGSTKSGSFG STSSSSDCAS PSAVTTPRTV LPAVKPNPKP APAPAVLLAA TVTREDLEVA LRRVVRSEAE
101: LAAVLAEAEA AGLAPEEAAA AEAEDEAELR ETFAVFDADG DGRISAEELR AVLASLGDEA CSVEDCRRMI GGVDADGDGF VCFDEFSRMM MPQGAAA

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.