Factsheet for PGSC0003DMT400027581

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
extracellular 1
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g018110.1.1	Tomato	plastid	93.06	83.06
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	62.04	65.37
PGSC0003DMT400076709	Potato	mitochondrion	60.65	62.09
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	57.41	55.86
Bra016936.1-P	Field mustard	cytosol	26.85	55.24
AT3G10190.1	Thale cress	cytosol, mitochondrion	44.44	45.93
CDY23852	Canola	cytosol, mitochondrion, plastid	44.91	45.54
KRG95139	Soybean	plastid	45.83	45.41
KRH66816	Soybean	plastid	45.83	45.21
CDY06925	Canola	cytosol, mitochondrion, plastid	45.37	45.16
CDY14768	Canola	cytosol, mitochondrion, plastid	44.91	44.7
CDX79938	Canola	cytosol, mitochondrion, plastid	43.98	44.6
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	43.98	44.6
TraesCS5B01G134200.1	Wheat	cytosol	18.06	43.33
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	43.06	43.06
Bra029821.1-P	Field mustard	plastid	41.2	42.79
CDY60169	Canola	cytosol, plastid	41.2	42.79
CDY00910	Canola	cytosol, plastid	42.13	41.74
PGSC0003DMT400026987	Potato	cytosol	25.93	38.62
PGSC0003DMT400071189	Potato	cytosol	26.39	38.26
GSMUA_Achr8P09680_001	Banana	plastid	35.65	38.12
PGSC0003DMT400078654	Potato	cytosol	26.85	37.18
PGSC0003DMT400018016	Potato	cytosol	25.46	36.67
PGSC0003DMT400074098	Potato	cytosol	25.0	35.06
PGSC0003DMT400025178	Potato	cytosol	27.78	34.48
TraesCS5D01G141900.1	Wheat	plastid	29.17	34.43
EES02048	Sorghum	plastid	30.09	34.03
HORVU5Hr1G043460.1	Barley	plastid	28.7	33.88
TraesCS3A01G488700.1	Wheat	nucleus, plastid	29.63	33.33
Zm00001d042108_P001	Maize	cytosol, plastid	29.63	33.33
Zm00001d004972_P001	Maize	plastid	28.7	33.16
PGSC0003DMT400075801	Potato	plastid	29.63	32.99
TraesCS3D01G484600.1	Wheat	cytosol, plastid	29.63	32.82
TraesCS3B01G536600.1	Wheat	nucleus, plastid	29.63	32.49
PGSC0003DMT400014742	Potato	cytosol	23.61	31.1
Os11t0141400-01	Rice	cytosol	26.85	30.85
PGSC0003DMT400089961	Potato	cytosol	24.54	30.64
Os01t0949300-01	Rice	plasma membrane	28.7	30.39
PGSC0003DMT400033250	Potato	cytosol	26.85	30.21
EES16521	Sorghum	plastid	29.63	29.91
KXG27695	Sorghum	plastid	26.85	29.44
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	38.43	28.82
PGSC0003DMT400086334	Potato	cytosol	23.15	28.25
PGSC0003DMT400066610	Potato	plastid	23.61	27.57
PGSC0003DMT400069195	Potato	golgi, plastid	26.39	26.03
Os12t0138050-00	Rice	plastid	27.31	24.79
HORVU3Hr1G106950.3	Barley	cytosol	29.63	23.7
PGSC0003DMT400071219	Potato	cytosol, plastid	21.76	23.62
PGSC0003DMT400079359	Potato	extracellular, golgi	23.15	21.37

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:102594754	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	UniProt:M1APW0	PFAM:PF13499
EnsemblPlantsGene:PGSC0003DMG400010631	PGSC:PGSC0003DMG400010631	EnsemblPlants:PGSC0003DMT400027581	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000296F1D8	RefSeq:XP_006364430.1	SEG:seg

Description

Calcium-binding allergen Ole e [Source:PGSC_GENE;Acc:PGSC0003DMG400010631]

Coordinates

chr4:+:12150074..12151066

Molecular Weight (calculated)

23598.3 Da

IEP (calculated)

4.120

GRAVY (calculated)

-0.505

Length

216 amino acids

Sequence
(BLAST)

001: MKFPKNFFKS KKSRSLSRSD DPSYSSSSSS SNKGGGCGGG GISTPTSVLP TLSNEISADD WSEISTAGVY SDLVQAFSVI DNGDGKIRKE QLEAILSRVG
101: GKSPPTEEEL VLLLDELDKN GDGCISLENF ETITSAFEPT PPSAAEDAGE MRDAFDFFDE DHDGKITGEE LFNVFRMIGD ERCTLEECKR MITSVDKNGD
201: GFVCFEDFCL MMEQQR

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.