Factsheet for PGSC0003DMT400076709

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021079	Potato	cytosol, mitochondrion, plastid	71.09	73.17
PGSC0003DMT400027581	Potato	cytosol, plastid	62.09	60.65
VIT_08s0007g05790.t01	Wine grape	mitochondrion, plastid	63.03	59.91
Bra016936.1-P	Field mustard	cytosol	27.01	54.29
TraesCS5B01G134200.1	Wheat	cytosol	20.38	47.78
CDY06925	Canola	cytosol, mitochondrion, plastid	48.34	47.0
CDY23852	Canola	cytosol, mitochondrion, plastid	46.92	46.48
CDY14768	Canola	cytosol, mitochondrion, plastid	47.39	46.08
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	45.5	45.07
CDX79938	Canola	cytosol, mitochondrion, plastid	45.5	45.07
KRG95139	Soybean	plastid	46.45	44.95
AT2G41410.1	Thale cress	cytosol, mitochondrion, plastid	45.5	44.44
KRH66816	Soybean	plastid	45.5	43.84
AT3G10190.1	Thale cress	cytosol, mitochondrion	43.13	43.54
PGSC0003DMT400026987	Potato	cytosol	29.86	43.45
Bra029821.1-P	Field mustard	plastid	42.18	42.79
CDY60169	Canola	cytosol, plastid	41.71	42.31
PGSC0003DMT400078654	Potato	cytosol	31.28	42.31
CDY00910	Canola	cytosol, plastid	43.6	42.2
GSMUA_Achr8P09680_001	Banana	plastid	39.34	41.09
EES02048	Sorghum	plastid	35.55	39.27
PGSC0003DMT400071189	Potato	cytosol	27.49	38.93
TraesCS3A01G488700.1	Wheat	nucleus, plastid	34.6	38.02
PGSC0003DMT400018016	Potato	cytosol	27.01	38.0
PGSC0003DMT400074098	Potato	cytosol	27.49	37.66
TraesCS3D01G484600.1	Wheat	cytosol, plastid	34.6	37.44
PGSC0003DMT400025178	Potato	cytosol	30.81	37.36
TraesCS5D01G141900.1	Wheat	plastid	32.23	37.16
HORVU5Hr1G043460.1	Barley	plastid	32.23	37.16
TraesCS3B01G536600.1	Wheat	nucleus, plastid	34.6	37.06
Zm00001d042108_P001	Maize	cytosol, plastid	33.65	36.98
Zm00001d004972_P001	Maize	plastid	32.23	36.36
Os01t0949300-01	Rice	plasma membrane	34.12	35.29
PGSC0003DMT400075801	Potato	plastid	32.23	35.05
EES16521	Sorghum	plastid	35.07	34.58
PGSC0003DMT400014742	Potato	cytosol	26.54	34.15
Os11t0141400-01	Rice	cytosol	30.33	34.04
KXG27695	Sorghum	plastid	31.75	34.01
PGSC0003DMT400033250	Potato	cytosol	28.91	31.77
GSMUA_Achr8P00110_001	Banana	endoplasmic reticulum, golgi	43.13	31.6
PGSC0003DMT400089961	Potato	cytosol	25.59	31.21
PGSC0003DMT400066610	Potato	plastid	25.59	29.19
Os12t0138050-00	Rice	plastid	32.7	28.99
PGSC0003DMT400086334	Potato	cytosol	23.7	28.25
HORVU3Hr1G106950.3	Barley	cytosol	35.07	27.41
PGSC0003DMT400069195	Potato	golgi, plastid	28.44	27.4
PGSC0003DMT400079359	Potato	extracellular, golgi	25.59	23.08
PGSC0003DMT400071219	Potato	cytosol, plastid	20.85	22.11

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:102603406	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	UniProt:M1CX95	PFAM:PF13499
EnsemblPlantsGene:PGSC0003DMG400029833	PGSC:PGSC0003DMG400029833	EnsemblPlants:PGSC0003DMT400076709	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF739	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000294E032	RefSeq:XP_006351283.1	SEG:seg

Description

Calcium-binding allergen Ole e [Source:PGSC_GENE;Acc:PGSC0003DMG400029833]

Coordinates

chr10:+:58038427..58039539

Molecular Weight (calculated)

23463.5 Da

IEP (calculated)

4.705

GRAVY (calculated)

-0.482

Length

211 amino acids

Sequence
(BLAST)

001: MKLLKNFPKK LFNYKKTRSI SRSQTSSFGS SSDSDSHPHP HRGFSKPTGS STPTSVLPNE ISAAEVGYAE LIHAFHMMDT DGDGKIRKEE LEAILSRVGT
101: EPPSKEELML LLEEVDVNGD GCISLQEFGA ISSAFGPPAC DSELRDAFDF FDADHDGKIT ADELFSVFRQ IGDSRCTLEE CRRMIRGVDK NGDGFVCFED
201: FCVMMEQQQR C

Best Arabidopsis Sequence Match ( AT3G10190.1 )
(BLAST)

001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR

Arabidopsis Description

CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.