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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029821.1-P Field mustard plastid 79.9 80.29
CDY60169 Canola cytosol, plastid 78.95 79.33
CDY00910 Canola cytosol, plastid 78.47 75.23
KRH66816 Soybean plastid 55.02 52.51
KRG95139 Soybean plastid 54.07 51.83
TraesCS5B01G134200.1 Wheat cytosol 22.01 51.11
AT2G41410.1 Thale cress cytosol, mitochondrion, plastid 52.15 50.46
VIT_08s0007g05790.t01 Wine grape mitochondrion, plastid 51.67 48.65
Solyc10g079420.1.1 Tomato nucleus, plastid 46.41 47.32
PGSC0003DMT400021079 Potato cytosol, mitochondrion, plastid 45.93 46.83
PGSC0003DMT400027581 Potato cytosol, plastid 45.93 44.44
PGSC0003DMT400076709 Potato mitochondrion 43.54 43.13
GSMUA_Achr8P09680_001 Banana plastid 41.63 43.07
Os11t0141400-01 Rice cytosol 37.32 41.49
HORVU5Hr1G043460.1 Barley plastid 35.41 40.44
TraesCS5D01G141900.1 Wheat plastid 34.93 39.89
EES16521 Sorghum plastid 38.76 37.85
Solyc04g018110.1.1 Tomato plastid 43.54 37.6
KXG27695 Sorghum plastid 35.41 37.56
TraesCS3A01G488700.1 Wheat nucleus, plastid 33.49 36.46
AT1G66400.1 Thale cress cytosol 27.27 36.31
TraesCS3D01G484600.1 Wheat cytosol, plastid 33.49 35.9
Zm00001d004972_P001 Maize plastid 32.06 35.83
TraesCS3B01G536600.1 Wheat nucleus, plastid 33.49 35.53
Zm00001d042108_P001 Maize cytosol, plastid 31.58 34.38
Os01t0949300-01 Rice plasma membrane 33.49 34.31
AT5G37770.1 Thale cress cytosol 26.32 34.16
Os12t0138050-00 Rice plastid 38.76 34.03
EES02048 Sorghum plastid 31.1 34.03
AT1G73630.1 Thale cress cytosol 26.32 33.74
AT1G05990.1 Thale cress cytosol 23.45 32.67
AT3G07490.1 Thale cress cytosol 23.45 32.03
AT1G18210.1 Thale cress cytosol 25.84 31.76
AT4G12860.1 Thale cress cytosol 22.97 31.58
AT1G24620.1 Thale cress cytosol 27.75 31.18
AT4G03290.1 Thale cress cytosol 22.49 30.52
GSMUA_Achr8P00110_001 Banana endoplasmic reticulum, golgi 41.63 30.21
AT2G15680.1 Thale cress plastid 26.32 29.41
AT5G44460.1 Thale cress cytosol 23.45 27.07
HORVU3Hr1G106950.3 Barley cytosol 33.49 25.93
AT2G43290.1 Thale cress extracellular 25.36 24.65
AT3G59440.1 Thale cress endoplasmic reticulum, extracellular 22.97 24.62
AT4G20780.1 Thale cress cytosol 21.05 23.04
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:820181ProteinID:AAF02827.1ProteinID:AEE74869.1EMBL:AK228130
ArrayExpress:AT3G10190EnsemblPlantsGene:AT3G10190RefSeq:AT3G10190TAIR:AT3G10190RefSeq:AT3G10190-TAIR-GEnsemblPlants:AT3G10190.1
TAIR:AT3G10190.1EMBL:BT003114InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674
GO:GO:0005488GO:GO:0005509GO:GO:0005515GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0008150GO:GO:0009605GO:GO:0009607GO:GO:0016020GO:GO:0046872
GO:GO:0050832InterPro:IPR002048RefSeq:NP_187630.1PFAM:PF13499PO:PO:0000005PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020100PO:PO:0025022PO:PO:0025281
ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR10891PANTHER:PTHR10891:SF739UniProt:Q9SS31SMART:SM00054
SUPFAM:SSF47473UniParc:UPI000000BEF0SEG:seg:::
Description
CML36Probable calcium-binding protein CML36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS31]
Coordinates
chr3:+:3155223..3156187
Molecular Weight (calculated)
22998.9 Da
IEP (calculated)
4.228
GRAVY (calculated)
-0.380
Length
209 amino acids
Sequence
(BLAST)
001: MKLAKLIPKR FFIRSKDRST VSKSPTAFSF GSASSSSGQD CKNSGGDGGG GSVTPTSILP EVPSPYSYVE ILQAFKLIDR DNDGAVSRHD LESLLSRLGP
101: DPLTEEEINV MLKEVDCDGD GTIRLEELAS RVVSLDPARD STELKETFEF FDADRDGLIS ADELLRVFST IGDERCTLDD CKRMIADVDE DGDGFVCFTE
201: FSRMMDLQR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.