Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70127 | Canola | cytosol | 87.65 | 89.22 |
| Bra025924.1-P | Field mustard | cytosol | 87.06 | 88.62 |
| CDY19196 | Canola | cytosol | 90.0 | 86.44 |
| Bra016564.1-P | Field mustard | cytosol | 86.47 | 84.48 |
| CDX96729 | Canola | cytosol | 86.47 | 84.48 |
| CDX83860 | Canola | cytosol | 85.88 | 82.49 |
| AT1G73630.1 | Thale cress | cytosol | 68.24 | 71.17 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 48.82 | 53.9 |
| PGSC0003DMT400074098 | Potato | cytosol | 48.24 | 53.25 |
| KRH41828 | Soybean | cytosol | 54.71 | 51.67 |
| PGSC0003DMT400014742 | Potato | cytosol | 49.41 | 51.22 |
| Solyc03g118810.1.1 | Tomato | cytosol | 48.24 | 50.0 |
| KRH24162 | Soybean | cytosol | 40.59 | 49.29 |
| KRH48613 | Soybean | cytosol | 50.59 | 48.04 |
| TraesCS1A01G134000.1 | Wheat | cytosol | 46.47 | 45.93 |
| KRH15405 | Soybean | cytosol | 38.82 | 45.83 |
| KRH02767 | Soybean | cytosol | 40.59 | 45.39 |
| TraesCS1B01G148000.1 | Wheat | cytosol | 45.88 | 45.35 |
| TraesCS1D01G125800.1 | Wheat | cytosol | 45.88 | 45.35 |
| AT1G66400.1 | Thale cress | cytosol | 41.18 | 44.59 |
| AT5G37770.1 | Thale cress | cytosol | 41.76 | 44.1 |
| EES19251 | Sorghum | cytosol | 44.71 | 42.46 |
| KRH16247 | Soybean | cytosol | 32.35 | 41.98 |
| KRH60530 | Soybean | plastid | 51.18 | 40.28 |
| Os05t0223000-01 | Rice | plasma membrane | 44.71 | 40.21 |
| GSMUA_Achr8P17950_001 | Banana | cytosol, plastid | 41.18 | 39.55 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 14.12 | 39.34 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 42.35 | 38.71 |
| TraesCS3D01G041500.1 | Wheat | cytosol | 41.76 | 38.38 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 38.82 | 38.37 |
| AT4G12860.1 | Thale cress | cytosol | 34.12 | 38.16 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 41.18 | 37.63 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 41.18 | 37.43 |
| Os01t0135700-01 | Rice | plasma membrane | 38.82 | 36.46 |
| AT1G24620.1 | Thale cress | cytosol | 39.41 | 36.02 |
| AT3G07490.1 | Thale cress | cytosol | 32.35 | 35.95 |
| AT1G05990.1 | Thale cress | cytosol | 31.18 | 35.33 |
| AT4G03290.1 | Thale cress | cytosol | 31.76 | 35.06 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 46.47 | 34.65 |
| AT2G15680.1 | Thale cress | plastid | 35.29 | 32.09 |
| EES00360 | Sorghum | cytosol | 38.24 | 31.55 |
| GSMUA_Achr6P09820_001 | Banana | cytosol | 48.24 | 31.42 |
| Zm00001d008573_P001 | Maize | plastid | 37.06 | 30.73 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 27.06 | 30.67 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 27.06 | 30.67 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 27.06 | 30.26 |
| Zm00001d039944_P001 | Maize | cytosol, plastid | 34.12 | 29.74 |
| TraesCS3D01G041400.1 | Wheat | cytosol, plastid | 41.18 | 29.41 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 25.88 | 29.14 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 32.94 | 28.72 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 25.29 | 28.67 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 26.47 | 28.66 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 26.47 | 28.48 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 26.47 | 28.12 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 28.82 | 27.68 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 25.88 | 27.67 |
| AT5G44460.1 | Thale cress | cytosol | 28.24 | 26.52 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 20.0 | 26.15 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 31.76 | 25.84 |
| AT4G20780.1 | Thale cress | cytosol | 28.82 | 25.65 |
| AT2G43290.1 | Thale cress | extracellular | 32.35 | 25.58 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 21.76 | 24.83 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 28.82 | 22.69 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 20.59 | 19.23 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:838401 | UniProt:A0A178WM36 | ProteinID:AAF78384.1 | ProteinID:AAF97837.1 |
| ProteinID:AEE29687.1 | ProteinID:AEE29688.1 | EMBL:AK229367 | ArrayExpress:AT1G18210 | EnsemblPlantsGene:AT1G18210 | RefSeq:AT1G18210 |
| TAIR:AT1G18210 | RefSeq:AT1G18210-TAIR-G | EnsemblPlants:AT1G18210.1 | TAIR:AT1G18210.1 | EMBL:AY045805 | EMBL:AY079394 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_173259.1 | RefSeq:NP_849686.1 |
| ProteinID:OAP19319.1 | PFAM:PF13499 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF698 | UniProt:Q9LE22 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00000A982F |
| SEG:seg | : | : | : | : | : |
Description
CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
Coordinates
chr1:-:6267698..6268939
Molecular Weight (calculated)
18351.2 Da
IEP (calculated)
3.952
GRAVY (calculated)
-0.449
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.