CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
vacuole 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0135700-01	Rice	plasma membrane	67.48	76.8
Zm00001d039944_P001	Maize	cytosol, plastid	69.42	73.33
Zm00001d008573_P001	Maize	plastid	72.82	73.17
HORVU4Hr1G081250.1	Barley	cytosol	20.39	68.85
TraesCS3B01G045500.1	Wheat	cytosol	61.65	67.91
TraesCS3D01G041500.1	Wheat	cytosol	60.19	67.03
TraesCS3A01G038300.1	Wheat	cytosol	59.22	65.59
HORVU3Hr1G007420.1	Barley	cytosol	58.74	65.05
HORVU5Hr1G018360.1	Barley	cytosol, plastid	41.26	56.29
HORVU6Hr1G076690.1	Barley	cytosol	40.78	56.0
HORVU7Hr1G101640.1	Barley	cytosol, plastid	40.78	55.26
HORVU7Hr1G029640.1	Barley	cytosol, plastid	41.75	54.78
HORVU1Hr1G074240.1	Barley	cytosol, plastid	39.81	54.67
HORVU6Hr1G034200.1	Barley	cytosol, plastid	41.75	54.09
HORVU1Hr1G023720.1	Barley	cytosol, plastid	41.75	53.75
HORVU4Hr1G032570.1	Barley	cytosol, plastid	38.35	52.67
TraesCS3D01G041400.1	Wheat	cytosol, plastid	60.19	52.1
HORVU0Hr1G031990.1	Barley	cytosol, plastid	39.32	51.27
HORVU5Hr1G077930.1	Barley	cytosol	36.41	50.34
HORVU4Hr1G085560.1	Barley	cytosol, plastid	43.2	50.28
HORVU5Hr1G117570.1	Barley	cytosol	31.55	50.0
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	34.95	46.75
PGSC0003DMT400014742	Potato	cytosol	36.89	46.34
PGSC0003DMT400074098	Potato	cytosol	34.47	46.1
Solyc03g118810.1.1	Tomato	cytosol	35.92	45.12
EES19251	Sorghum	cytosol	37.38	43.02
KRH24162	Soybean	cytosol	28.64	42.14
Bra015979.1-P	Field mustard	cytosol	32.04	41.51
CDX72996	Canola	cytosol	32.04	41.51
CDX96488	Canola	cytosol	32.04	41.51
KRH48613	Soybean	cytosol	35.44	40.78
KRH41828	Soybean	cytosol	35.44	40.56
EES04217	Sorghum	cytosol, mitochondrion, plastid	36.89	40.21
CDY70127	Canola	cytosol	32.04	39.52
Bra025924.1-P	Field mustard	cytosol	32.04	39.52
AT1G73630.1	Thale cress	cytosol	30.58	38.65
AT1G18210.1	Thale cress	cytosol	31.55	38.24
Bra016564.1-P	Field mustard	cytosol	32.04	37.93
HORVU5Hr1G073590.1	Barley	cytosol, plastid	33.5	37.91
CDX83860	Canola	cytosol	32.52	37.85
KRH02767	Soybean	cytosol	27.67	37.5
CDY19196	Canola	cytosol	32.04	37.29
CDX96729	Canola	cytosol	31.07	36.78
KRH15405	Soybean	cytosol	25.24	36.11
OQU78964	Sorghum	cytosol	27.18	33.94
KRH16247	Soybean	cytosol	21.36	33.59
EES19444	Sorghum	plastid	31.55	32.66
KRH60530	Soybean	plastid	33.98	32.41
EER96860	Sorghum	cytosol, mitochondrion	26.7	29.89
EER97743	Sorghum	plastid	28.16	29.15
EES11048	Sorghum	plastid	31.55	27.31
EES02048	Sorghum	plastid	25.24	27.23
EER92319	Sorghum	cytosol	24.76	27.13
EER87935	Sorghum	endoplasmic reticulum, vacuole	31.07	26.12
KXG27695	Sorghum	plastid	24.76	25.89
KXG39446	Sorghum	plastid	23.79	25.65
EES16521	Sorghum	plastid	25.73	24.77

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:8061350	UniProt:C5XQS6	EnsemblPlants:EES00360	ProteinID:EES00360
ProteinID:EES00360.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF676	SMART:SM00054	EnsemblPlantsGene:SORBI_3003G082600	SUPFAM:SSF47473	unigene:Sbi.713	UniParc:UPI0001A8478F
RefSeq:XP_002455240.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:7081834..7084517

Molecular Weight (calculated)

21355.5 Da

IEP (calculated)

4.424

GRAVY (calculated)

-0.574

Length

206 amino acids

Sequence
(BLAST)

001: MSTTSASENK QAQHQQARRP AAVVSSAADD AEMQRVFARI DADGDGRISP SELAAVSRAI SPPSSSSHGR REVAAMMDEL DTDRDGFVDL GEFKAFHARA
101: RAGGGRGGDN GGSGGDELDA ELRAAFDVYD VDGDGRITAA ELGKVLGRIG EGCSAEECQR MIASVDTDGD GCVGFEEFKK MMCPQQPQAG AGADAGAAGP
201: DKAKKE

Best Arabidopsis Sequence Match ( AT1G66400.1 )
(BLAST)

001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA

Arabidopsis Description

CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.