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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023992_P001 Maize cytosol 85.45 88.68
Os12t0228800-01 Rice cytosol 78.18 76.79
TraesCS7A01G050500.1 Wheat cytosol 75.76 76.69
GSMUA_Achr2P05840_001 Banana cytosol 69.09 76.0
GSMUA_Achr1P13420_001 Banana cytosol 67.88 74.67
GSMUA_Achr8P28890_001 Banana cytosol 66.06 72.67
TraesCS7D01G045800.1 Wheat cytosol 75.15 71.68
Solyc06g083000.1.1 Tomato cytosol 64.24 71.14
AT3G07490.1 Thale cress cytosol 65.45 70.59
VIT_07s0141g00300.t01 Wine grape cytosol 65.45 70.13
VIT_07s0289g00040.t01 Wine grape cytosol 65.45 70.13
CDY60818 Canola cytosol 63.03 69.8
Bra040379.1-P Field mustard cytosol 63.03 69.8
TraesCS4A01G436700.1 Wheat cytosol 73.33 69.54
PGSC0003DMT400071189 Potato cytosol 62.42 69.13
GSMUA_Achr6P28770_001 Banana cytosol 62.42 68.67
GSMUA_Achr3P16870_001 Banana cytosol 62.42 68.21
Bra001254.1-P Field mustard cytosol 63.03 67.97
CDY07993 Canola cytosol 63.03 67.97
CDX74043 Canola cytosol 62.42 67.32
Solyc09g055880.1.1 Tomato cytosol 60.0 66.0
KRG95097 Soybean cytosol 59.39 64.47
KRH66763 Soybean cytosol 58.79 63.82
HORVU7Hr1G008910.2 Barley cytosol 77.58 59.81
GSMUA_Achr9P07990_001 Banana endoplasmic reticulum, golgi, plastid 69.09 51.58
EES11048 Sorghum plastid 63.64 44.12
EER97743 Sorghum plastid 43.03 35.68
EER92319 Sorghum cytosol 40.61 35.64
EES19251 Sorghum cytosol 38.18 35.2
KXG39446 Sorghum plastid 40.61 35.08
EES19444 Sorghum plastid 38.79 32.16
EER96860 Sorghum cytosol, mitochondrion 35.15 31.52
EES04217 Sorghum cytosol, mitochondrion, plastid 35.76 31.22
EER87935 Sorghum endoplasmic reticulum, vacuole 45.45 30.61
EES00360 Sorghum cytosol 33.94 27.18
EES02048 Sorghum plastid 29.7 25.65
EES16521 Sorghum plastid 30.91 23.83
KXG27695 Sorghum plastid 27.88 23.35
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1UniProt:A0A1B6PC22InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_dom
GO:GO:0003674GO:GO:0005488GO:GO:0005509InterPro:IPR002048ProteinID:KXG23290.1EnsemblPlants:OQU78964
ProteinID:OQU78964ProteinID:OQU78964.1PFAM:PF13499ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR10891
PANTHER:PTHR10891:SF546SMART:SM00054EnsemblPlantsGene:SORBI_3008G079200SUPFAM:SSF47473UniParc:UPI00081AE61ASEG:seg
Description
hypothetical protein
Coordinates
chr8:-:12595330..12596870
Molecular Weight (calculated)
18211.2 Da
IEP (calculated)
4.124
GRAVY (calculated)
-0.603
Length
165 amino acids
Sequence
(BLAST)
001: MSSSMDSSEL RKVFQMFDKN GDGQITKKEL GESLKNLGIF IADEELDATM DKIDVNGDGC VDVEEFGRLY RSIVEDGPVA DADGDKHDED EDMREAFNVF
101: DQNGDGYITV DELRSVLASL GLKQGRTAED CRKMISKVDA DGDGRVDFTE FKQMMRGGGF AALGR
Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)
001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
Arabidopsis Description
CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.