Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 3
- plasma membrane 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0141g00300.t01 | Wine grape | cytosol | 80.0 | 77.92 |
| VIT_07s0289g00040.t01 | Wine grape | cytosol | 80.0 | 77.92 |
| Solyc06g083000.1.1 | Tomato | cytosol | 77.33 | 77.85 |
| AT3G07490.1 | Thale cress | cytosol | 76.0 | 74.51 |
| Bra040379.1-P | Field mustard | cytosol | 74.0 | 74.5 |
| CDY60818 | Canola | cytosol | 74.0 | 74.5 |
| GSMUA_Achr1P13420_001 | Banana | cytosol | 74.0 | 74.0 |
| GSMUA_Achr2P05840_001 | Banana | cytosol | 72.67 | 72.67 |
| Bra001254.1-P | Field mustard | cytosol | 73.33 | 71.9 |
| CDY07993 | Canola | cytosol | 73.33 | 71.9 |
| GSMUA_Achr8P28890_001 | Banana | cytosol | 71.33 | 71.33 |
| CDX74043 | Canola | cytosol | 72.67 | 71.24 |
| GSMUA_Achr3P16870_001 | Banana | cytosol | 71.33 | 70.86 |
| GSMUA_Achr6P28770_001 | Banana | cytosol | 70.0 | 70.0 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 67.33 | 67.33 |
| Solyc11g044920.1.1 | Tomato | cytosol | 51.33 | 63.64 |
| Zm00001d023992_P001 | Maize | cytosol | 66.67 | 62.89 |
| OQU78964 | Sorghum | cytosol | 66.0 | 60.0 |
| Os12t0228800-01 | Rice | cytosol | 64.67 | 57.74 |
| TraesCS7A01G050500.1 | Wheat | cytosol | 61.33 | 56.44 |
| TraesCS7D01G045800.1 | Wheat | cytosol | 61.33 | 53.18 |
| TraesCS4A01G436700.1 | Wheat | cytosol | 61.33 | 52.87 |
| GSMUA_Achr9P07990_001 | Banana | endoplasmic reticulum, golgi, plastid | 74.67 | 50.68 |
| Os04t0492800-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 63.33 | 48.47 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 64.67 | 45.33 |
| TraesCS2B01G367500.1 | Wheat | plastid | 60.0 | 42.06 |
| TraesCS2A01G349100.1 | Wheat | plastid | 59.33 | 41.4 |
| TraesCS2D01G347500.1 | Wheat | plastid | 60.0 | 40.91 |
| Solyc02g091500.1.1 | Tomato | cytosol | 39.33 | 37.82 |
| EES11048 | Sorghum | plastid | 59.33 | 37.4 |
| Zm00001d003197_P001 | Maize | plastid | 55.33 | 37.39 |
| Solyc02g063350.1.1 | Tomato | cytosol | 36.0 | 37.24 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 36.0 | 35.06 |
| Solyc03g118810.1.1 | Tomato | cytosol | 36.67 | 33.54 |
| Solyc01g005370.2.1 | Tomato | cytosol | 38.0 | 33.14 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 47.33 | 31.98 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 40.0 | 31.41 |
| Solyc02g065000.1.1 | Tomato | cytosol | 34.0 | 29.48 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 38.0 | 28.64 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 37.33 | 27.32 |
| Solyc01g108190.2.1 | Tomato | plastid | 33.33 | 27.03 |
| Solyc04g018110.1.1 | Tomato | plastid | 37.33 | 23.14 |
Protein Annotations
| EnsemblPlants:Solyc09g055880.1.1 | EnsemblPlantsGene:Solyc09g055880.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 |
| PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR01697 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000276B153 | UniProt:K4CT83 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr9:-:46009243..46009695
Molecular Weight (calculated)
17484.9 Da
IEP (calculated)
4.204
GRAVY (calculated)
-0.579
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKEIRRVF LMFDRNGDGK ITRKELSDSL QNMGIYIPEM EFVQMIDKID INRDGFVDME EFGTLYQSIM DDKDEEEDMR EAFNVFDQND DGFITVEELR
101: SVLSSLGLKQ GKTLEDCKRM IIKVDVDGDG MVDYKEFRQM MKRGGFSSLS
101: SVLSSLGLKQ GKTLEDCKRM IIKVDVDGDG MVDYKEFRQM MKRGGFSSLS
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Arabidopsis Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.