Factsheet for Zm00001d003197_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11048	Sorghum	plastid	83.33	77.73
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	59.46	67.35
TraesCS2B01G367500.1	Wheat	plastid	64.86	67.29
TraesCS2A01G349100.1	Wheat	plastid	64.41	66.51
TraesCS2D01G347500.1	Wheat	plastid	63.96	64.55
GSMUA_Achr3P16870_001	Banana	cytosol	43.69	64.24
GSMUA_Achr8P28890_001	Banana	cytosol	43.24	64.0
Zm00001d023992_P001	Maize	cytosol	44.14	61.64
GSMUA_Achr1P13420_001	Banana	cytosol	41.44	61.33
GSMUA_Achr6P28770_001	Banana	cytosol	41.44	61.33
GSMUA_Achr2P05840_001	Banana	cytosol	40.99	60.67
CDY60818	Canola	cytosol	40.09	59.73
Bra040379.1-P	Field mustard	cytosol	40.09	59.73
VIT_07s0141g00300.t01	Wine grape	cytosol	40.09	57.79
VIT_07s0289g00040.t01	Wine grape	cytosol	40.09	57.79
AT3G07490.1	Thale cress	cytosol	39.64	57.52
KRG95097	Soybean	cytosol	38.74	56.58
KRH66763	Soybean	cytosol	38.74	56.58
PGSC0003DMT400071189	Potato	cytosol	37.84	56.38
Solyc06g083000.1.1	Tomato	cytosol	37.84	56.38
Solyc09g055880.1.1	Tomato	cytosol	37.39	55.33
Bra001254.1-P	Field mustard	cytosol	37.84	54.9
CDY07993	Canola	cytosol	37.84	54.9
CDX74043	Canola	cytosol	37.84	54.9
GSMUA_Achr9P07990_001	Banana	endoplasmic reticulum, golgi, plastid	48.2	48.42
Zm00001d042107_P001	Maize	mitochondrion	33.33	38.14
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	40.09	36.63
Zm00001d047535_P001	Maize	plastid	30.18	35.83
Zm00001d029028_P001	Maize	plastid	30.18	35.64
Zm00001d022430_P001	Maize	cytosol, plastid	31.53	35.0
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	29.28	34.39
Zm00001d038061_P001	Maize	mitochondrion	31.53	34.31
Zm00001d007181_P001	Maize	plastid	31.08	33.99
Zm00001d008573_P001	Maize	plastid	30.18	32.68
Zm00001d039944_P001	Maize	cytosol, plastid	27.03	30.77
Zm00001d004972_P001	Maize	plastid	24.77	29.41
Zm00001d020722_P001	Maize	cytosol, mitochondrion	24.32	29.35
Zm00001d042108_P001	Maize	cytosol, plastid	25.23	29.17

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EMBL:BT068562	UniProt:C0PJU3	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	ProteinID:ONM16342.1
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF642	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000195CF60	EnsemblPlantsGene:Zm00001d003197	EnsemblPlants:Zm00001d003197_P001	EnsemblPlants:Zm00001d003197_T001	SEG:seg

Description

Calmodulin-like protein 2

Coordinates

chr2:-:35313291..35313959

Molecular Weight (calculated)

24002.9 Da

IEP (calculated)

4.184

GRAVY (calculated)

-0.575

Length

222 amino acids

Sequence
(BLAST)

001: MLSSSHLVKL PLLPRGLLSY LPASILPSGR ESTADAAPST PPSSKKMSSS AQQQQQQQAG SSKAESAELA RVFELFDKDG DGRITREELA ESLRKLGMGV
101: PGDDELASMM ARVDANGDGC VDAEEFGELY RGIMDGAAEE EEEEDDDDDD MREAFRVFDA NGDGYITADE LGAVLSSLGL RQGRTAEECR RMIGRVDRDG
201: DGRVDFREFR QMMRAGGLAA LG

Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)

001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL

Arabidopsis Description

CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.