Factsheet for Zm00001d038061_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19444	Sorghum	plastid	86.27	88.44
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	80.88	87.3
HORVU1Hr1G057410.1	Barley	mitochondrion	73.04	78.84
TraesCS1B01G250900.1	Wheat	mitochondrion	72.55	78.31
TraesCS1A01G238800.1	Wheat	mitochondrion	71.57	77.25
TraesCS1D01G239000.1	Wheat	mitochondrion	71.57	77.25
Os05t0380900-01	Rice	cytosol, mitochondrion	68.63	69.65
Zm00001d042107_P001	Maize	mitochondrion	63.24	66.49
KRH75577	Soybean	cytosol	34.31	46.05
KRH60410	Soybean	cytosol, plastid	41.18	44.68
Solyc01g005370.2.1	Tomato	cytosol	35.29	41.86
Zm00001d023992_P001	Maize	cytosol	32.35	41.51
PGSC0003DMT400025178	Potato	cytosol	35.29	41.38
Solyc04g008000.2.1	Tomato	cytosol, plastid	38.24	40.84
PGSC0003DMT400075801	Potato	plastid	38.73	40.72
KRH49632	Soybean	cytosol, mitochondrion, plastid	36.27	40.66
CDY03874	Canola	cytosol	35.78	39.67
CDY40786	Canola	cytosol	35.78	39.67
Bra012497.1-P	Field mustard	cytosol	35.29	39.13
Bra032785.1-P	Field mustard	cytosol	24.51	39.06
AT1G24620.1	Thale cress	cytosol	35.29	38.71
Bra010974.1-P	Field mustard	cytosol	34.31	37.43
CDY36129	Canola	cytosol	34.31	37.43
CDX84967	Canola	cytosol	34.31	37.04
CDY27574	Canola	cytosol	34.31	36.65
KRH37459	Soybean	cytosol	18.14	36.27
Zm00001d008573_P001	Maize	plastid	34.31	34.15
Zm00001d003197_P001	Maize	plastid	34.31	31.53
Zm00001d039944_P001	Maize	cytosol, plastid	29.41	30.77
Zm00001d047535_P001	Maize	plastid	27.94	30.48
Zm00001d020722_P001	Maize	cytosol, mitochondrion	26.47	29.35
Zm00001d029028_P001	Maize	plastid	26.47	28.72
Zm00001d007181_P001	Maize	plastid	28.43	28.57
Zm00001d022430_P001	Maize	cytosol, plastid	27.94	28.5
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	33.82	28.4
Zm00001d042108_P001	Maize	cytosol, plastid	25.98	27.6
Zm00001d004972_P001	Maize	plastid	24.02	26.2
CDY24421	Canola	endoplasmic reticulum, golgi	33.82	25.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100284346	MapMan:35.1	ProteinID:AQK85539.1	UniProt:B6TSM3	EMBL:BT064743
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EMBL:EU967988	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF635	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000182DBD3	EnsemblPlantsGene:Zm00001d038061	EnsemblPlants:Zm00001d038061_P001
EnsemblPlants:Zm00001d038061_T001	SEG:seg	:	:	:	:

Description

Probable calcium-binding protein CML25

Coordinates

chr6:+:146627115..146627729

Molecular Weight (calculated)

21350.9 Da

IEP (calculated)

5.116

GRAVY (calculated)

-0.360

Length

204 amino acids

Sequence
(BLAST)

001: MGKVRSFFSR SRSGKRGSAR RAGSSSPHSS AASAPPSPSP LPRRSPSSSS TTTRDETERV FRKFDANGDG QISRSELAAL FEGVGHAVTD DEVSRMMEEA
101: DADGDGCISL PEFAALMESA SADAAAVEED LRHAFMVFDA DGNGLITPAE LARVLRGLGE SATVAQCRRM IQGVDRNGDG LVSFDEFKLM MAAGGGGGFG
201: RIGA

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.