CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03874	Canola	cytosol	100.0	100.0
Bra012497.1-P	Field mustard	cytosol	99.46	99.46
CDY36129	Canola	cytosol	87.5	86.1
CDX84967	Canola	cytosol	88.04	85.71
CDY27574	Canola	cytosol	88.04	84.82
CDY24421	Canola	endoplasmic reticulum, golgi	88.04	59.78
KRH75577	Soybean	cytosol	48.91	59.21
Solyc01g005370.2.1	Tomato	cytosol	54.35	58.14
KRH37459	Soybean	cytosol	32.07	57.84
PGSC0003DMT400025178	Potato	cytosol	54.35	57.47
KRH60410	Soybean	cytosol, plastid	57.61	56.38
Solyc04g008000.2.1	Tomato	cytosol, plastid	56.52	54.45
KRH49632	Soybean	cytosol, mitochondrion, plastid	53.26	53.85
PGSC0003DMT400075801	Potato	plastid	55.98	53.09
CDY55679	Canola	cytosol	36.41	43.79
CDX96150	Canola	cytosol	35.87	43.14
CDX99691	Canola	cytosol	36.96	43.04
CDY27652	Canola	cytosol	36.96	42.77
CDY60818	Canola	cytosol	34.24	42.28
Os01t0949500-01	Rice	plasma membrane	41.85	41.62
CDX90890	Canola	cytosol	34.78	41.56
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	41.3	40.86
CDY22119	Canola	cytosol	33.7	40.79
CDY21953	Canola	cytosol	33.7	40.79
EES04217	Sorghum	cytosol, mitochondrion, plastid	41.85	40.74
CDY63788	Canola	cytosol	33.15	40.4
CDX86544	Canola	cytosol	33.15	40.4
CDY39714	Canola	cytosol	33.15	40.13
TraesCS3B01G536200.1	Wheat	cytosol, plastid	41.3	40.0
TraesCS3B01G538300.1	Wheat	cytosol, plastid	41.3	40.0
TraesCS3D01G483200.1	Wheat	cytosol, plastid	41.3	39.79
CDX96729	Canola	cytosol	37.5	39.66
CDX96488	Canola	cytosol	34.24	39.62
CDX72996	Canola	cytosol	34.24	39.62
CDY19196	Canola	cytosol	38.04	39.55
CDX83860	Canola	cytosol	38.04	39.55
CDY70127	Canola	cytosol	35.87	39.52
CDY33702	Canola	cytosol	32.61	39.47
TraesCS3A01G488400.1	Wheat	cytosol, plastid	40.76	39.27
HORVU3Hr1G107090.2	Barley	cytosol, plastid	40.76	39.27
Zm00001d042107_P001	Maize	mitochondrion	41.3	39.18
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	40.22	39.15
CDX74043	Canola	cytosol	32.07	38.56
CDY07993	Canola	cytosol	32.07	38.56
TraesCS1B01G250900.1	Wheat	mitochondrion	39.13	38.1
HORVU1Hr1G057410.1	Barley	mitochondrion	39.13	38.1
TraesCS1D01G239000.1	Wheat	mitochondrion	39.13	38.1
TraesCS1A01G238800.1	Wheat	mitochondrion	39.13	38.1
CDY17950	Canola	cytosol	33.15	36.75
EES19444	Sorghum	plastid	39.13	36.18
Os05t0380900-01	Rice	cytosol, mitochondrion	39.13	35.82
Zm00001d038061_P001	Maize	mitochondrion	39.67	35.78
CDY30399	Canola	extracellular	34.78	30.48
CDY49013	Canola	cytosol	29.89	30.22
CDX94789	Canola	cytosol	29.89	30.22
CDY23356	Canola	vacuole	34.24	29.86
CDY14927	Canola	cytosol	29.35	29.67
CDY66855	Canola	plastid	30.43	29.63
CDY31433	Canola	cytosol, plastid	29.35	29.35
CDX76451	Canola	cytosol, plastid	29.35	29.35
CDY37233	Canola	plastid	29.89	29.1
CDX79002	Canola	cytosol	29.35	28.72
CDX94006	Canola	cytosol	28.8	28.49
CDY06002	Canola	extracellular, vacuole	30.43	28.28
CDX82773	Canola	cytosol	29.35	28.27
CDX67796	Canola	vacuole	30.98	28.08
CDX83488	Canola	extracellular	32.61	28.04
CDY72611	Canola	extracellular, vacuole	30.43	28.0
CDX96968	Canola	cytosol	29.35	27.98
CDX98375	Canola	endoplasmic reticulum	30.98	27.94
CDY06925	Canola	cytosol, mitochondrion, plastid	31.52	26.73
CDY23852	Canola	cytosol, mitochondrion, plastid	30.43	26.29
CDY60169	Canola	cytosol, plastid	29.35	25.96
CDX79938	Canola	cytosol, mitochondrion, plastid	29.89	25.82
CDY14768	Canola	cytosol, mitochondrion, plastid	30.43	25.81
CDY00910	Canola	cytosol, plastid	30.43	25.69
CDY44217	Canola	endoplasmic reticulum, golgi	32.61	21.28
CDX98672	Canola	cytosol	28.8	20.87

Protein Annotations

EnsemblPlants:CDY40786	EnsemblPlantsGene:GSBRNA2T00071693001	Gene3D:1.10.238.10	GO:A0A078HSS0	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF738	PFAM:PF13499	PFscan:PS50222	ProteinID:CDY40786	ProteinID:CDY40786.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EF1AC4	UniProt:A0A078HSS0	MapMan:35.1	:

Description

BnaAnng06490DBnaAnng06490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSS0]

Coordinates

chrLK032478:+:285710..286264

Molecular Weight (calculated)

20175.7 Da

IEP (calculated)

4.344

GRAVY (calculated)

-0.539

Length

184 amino acids

Sequence
(BLAST)

001: MFNSKKESNG TASRTGADSP FLQKARSGKT EVRELEAVFK KFDVNGDGKI SSKELGAIMA SLGHEVPEEE LQKAVAEIDK KGDGYINLEE FVELFTKGMD
101: QNDVLENLKD AFSVYDIDGN GSISAEELHE VLRSLGDECS IAECRKMISG VDKDGDGTID FEEFKVMMTM GSRRDNVMGG GAQW

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.