Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003376.1-P | Field mustard | vacuole | 99.01 | 99.01 |
| CDX98375 | Canola | endoplasmic reticulum | 97.54 | 97.06 |
| CDY72611 | Canola | extracellular, vacuole | 89.16 | 90.5 |
| CDY06002 | Canola | extracellular, vacuole | 88.18 | 90.4 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 85.22 | 88.72 |
| CDY23356 | Canola | vacuole | 74.88 | 72.04 |
| CDY30399 | Canola | extracellular | 73.89 | 71.43 |
| CDY07993 | Canola | cytosol | 52.71 | 69.93 |
| CDX74043 | Canola | cytosol | 52.22 | 69.28 |
| CDX83488 | Canola | extracellular | 72.91 | 69.16 |
| CDY63788 | Canola | cytosol | 51.23 | 68.87 |
| CDX86544 | Canola | cytosol | 51.23 | 68.87 |
| KRH29625 | Soybean | cytosol | 35.96 | 68.87 |
| PGSC0003DMT400018016 | Potato | cytosol | 49.26 | 66.67 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 49.26 | 66.67 |
| CDY60818 | Canola | cytosol | 47.29 | 64.43 |
| CDX90890 | Canola | cytosol | 48.77 | 64.29 |
| CDY22119 | Canola | cytosol | 47.78 | 63.82 |
| CDY21953 | Canola | cytosol | 47.29 | 63.16 |
| CDY33702 | Canola | cytosol | 46.31 | 61.84 |
| CDY39714 | Canola | cytosol | 45.81 | 61.18 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 61.58 | 58.41 |
| CDY17950 | Canola | cytosol | 46.31 | 56.63 |
| Solyc11g044920.1.1 | Tomato | cytosol | 33.5 | 56.2 |
| KRH24625 | Soybean | cytosol | 60.59 | 55.66 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 59.11 | 54.79 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 70.44 | 50.71 |
| CDX96150 | Canola | cytosol | 30.05 | 39.87 |
| CDY55679 | Canola | cytosol | 29.56 | 39.22 |
| CDX99691 | Canola | cytosol | 29.56 | 37.97 |
| CDY27652 | Canola | cytosol | 29.56 | 37.74 |
| CDX94006 | Canola | cytosol | 32.51 | 35.48 |
| CDX94789 | Canola | cytosol | 31.53 | 35.16 |
| CDY49013 | Canola | cytosol | 31.03 | 34.62 |
| CDX96729 | Canola | cytosol | 29.56 | 34.48 |
| CDY70127 | Canola | cytosol | 28.08 | 34.13 |
| CDY14927 | Canola | cytosol | 30.54 | 34.07 |
| CDX79002 | Canola | cytosol | 31.03 | 33.51 |
| CDX72996 | Canola | cytosol | 26.11 | 33.33 |
| CDX96488 | Canola | cytosol | 26.11 | 33.33 |
| CDY19196 | Canola | cytosol | 28.57 | 32.77 |
| CDY31433 | Canola | cytosol, plastid | 29.56 | 32.61 |
| CDX76451 | Canola | cytosol, plastid | 29.56 | 32.61 |
| CDX82773 | Canola | cytosol | 30.54 | 32.46 |
| CDX83860 | Canola | cytosol | 28.08 | 32.2 |
| CDX96968 | Canola | cytosol | 30.54 | 32.12 |
| CDY37233 | Canola | plastid | 29.06 | 31.22 |
| CDY66855 | Canola | plastid | 29.06 | 31.22 |
| CDY36129 | Canola | cytosol | 28.57 | 31.02 |
| CDY40786 | Canola | cytosol | 28.08 | 30.98 |
| CDY03874 | Canola | cytosol | 28.08 | 30.98 |
| CDX84967 | Canola | cytosol | 28.08 | 30.16 |
| CDY27574 | Canola | cytosol | 28.08 | 29.84 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 26.6 | 25.35 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 27.09 | 25.35 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 26.11 | 24.88 |
| CDX98672 | Canola | cytosol | 31.03 | 24.8 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 26.11 | 24.42 |
| CDY60169 | Canola | cytosol, plastid | 23.65 | 23.08 |
| CDY00910 | Canola | cytosol, plastid | 23.65 | 22.02 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 28.57 | 21.4 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078BST8 | EnsemblPlants:CDX67796 | ProteinID:CDX67796 | ProteinID:CDX67796.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| EnsemblPlantsGene:GSBRNA2T00098990001 | InterPro:IPR002048 | PFAM:PF13499 | PRINTS:PR01697 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0004EE7E89 |
Description
BnaA07g18360D
Coordinates
chrLK031787:+:2285119..2285730
Molecular Weight (calculated)
23124.6 Da
IEP (calculated)
4.225
GRAVY (calculated)
-0.416
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRVFLLYNL INSFLLCLVP KKLRVLFPPS WYINDNIPPP LSEPEPKSQT RTDPVDLKQV FQMFDKNGDG RITKEELNDS LENLGIFMPD KDLIQMIHKM
101: DANGDGCVDI HEFESLYGSI VEEKEEEDMR DAFNVFDQDG DGFISVEELK SVMASLGLKQ GKTLECCKEM IMQVDEDGDG RVNYKEFLQM MKTGGFSNTS
201: SSN
101: DANGDGCVDI HEFESLYGSI VEEKEEEDMR DAFNVFDQDG DGFISVEELK SVMASLGLKQ GKTLECCKEM IMQVDEDGDG RVNYKEFLQM MKTGGFSNTS
201: SSN
001: MVRVFLLYNL FNSFLLCLVP KKLRVFFPPS WYIDDKNPPP PDESETESPV DLKRVFQMFD KNGDGRITKE ELNDSLENLG IFMPDKDLIQ MIQKMDANGD
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
101: GCVDINEFES LYGSIVEEKE EGDMRDAFNV FDQDGDGFIT VEELNSVMTS LGLKQGKTLE CCKEMIMQVD EDGDGRVNYK EFLQMMKSGD FSNRS
Arabidopsis Description
CML4Calmodulin-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX27]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.