Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019554.1-P | Field mustard | cytosol | 79.05 | 98.22 |
| Bra034870.1-P | Field mustard | cytosol | 79.05 | 98.22 |
| Bra037722.1-P | Field mustard | cytosol | 79.05 | 98.22 |
| CDY23356 | Canola | vacuole | 96.67 | 96.21 |
| AT2G43290.1 | Thale cress | extracellular | 89.05 | 86.98 |
| CDX83488 | Canola | extracellular | 87.14 | 85.51 |
| CDY72611 | Canola | extracellular, vacuole | 71.9 | 75.5 |
| CDY63788 | Canola | cytosol | 54.29 | 75.5 |
| CDX86544 | Canola | cytosol | 54.29 | 75.5 |
| CDY06002 | Canola | extracellular, vacuole | 70.95 | 75.25 |
| CDX67796 | Canola | vacuole | 71.43 | 73.89 |
| CDX98375 | Canola | endoplasmic reticulum | 70.95 | 73.04 |
| KRH29625 | Soybean | cytosol | 35.71 | 70.75 |
| CDY21953 | Canola | cytosol | 50.48 | 69.74 |
| CDX90890 | Canola | cytosol | 50.95 | 69.48 |
| CDY07993 | Canola | cytosol | 50.48 | 69.28 |
| CDY22119 | Canola | cytosol | 50.0 | 69.08 |
| CDX74043 | Canola | cytosol | 50.0 | 68.63 |
| CDY60818 | Canola | cytosol | 47.62 | 67.11 |
| PGSC0003DMT400018016 | Potato | cytosol | 46.19 | 64.67 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 46.19 | 64.67 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 85.71 | 63.83 |
| Solyc11g044920.1.1 | Tomato | cytosol | 36.67 | 63.64 |
| VIT_05s0102g00450.t01 | Wine grape | endoplasmic reticulum, golgi | 62.86 | 61.68 |
| CDY17950 | Canola | cytosol | 48.57 | 61.45 |
| CDY39714 | Canola | cytosol | 44.29 | 61.18 |
| CDY33702 | Canola | cytosol | 43.81 | 60.53 |
| PGSC0003DMT400069195 | Potato | golgi, plastid | 59.05 | 56.62 |
| KRH24625 | Soybean | cytosol | 59.05 | 56.11 |
| CDX96150 | Canola | cytosol | 30.95 | 42.48 |
| CDY55679 | Canola | cytosol | 30.48 | 41.83 |
| CDX99691 | Canola | cytosol | 30.95 | 41.14 |
| CDY27652 | Canola | cytosol | 30.95 | 40.88 |
| CDX94006 | Canola | cytosol | 31.9 | 36.02 |
| CDY14927 | Canola | cytosol | 30.95 | 35.71 |
| CDX94789 | Canola | cytosol | 30.48 | 35.16 |
| CDY03874 | Canola | cytosol | 30.48 | 34.78 |
| CDY40786 | Canola | cytosol | 30.48 | 34.78 |
| CDY49013 | Canola | cytosol | 30.0 | 34.62 |
| CDY36129 | Canola | cytosol | 30.48 | 34.22 |
| CDY70127 | Canola | cytosol | 27.14 | 34.13 |
| CDX96729 | Canola | cytosol | 28.1 | 33.91 |
| CDX96968 | Canola | cytosol | 30.95 | 33.68 |
| CDX79002 | Canola | cytosol | 30.0 | 33.51 |
| CDX84967 | Canola | cytosol | 30.0 | 33.33 |
| CDX72996 | Canola | cytosol | 25.24 | 33.33 |
| CDX96488 | Canola | cytosol | 25.24 | 33.33 |
| CDY27574 | Canola | cytosol | 30.0 | 32.98 |
| CDX82773 | Canola | cytosol | 30.0 | 32.98 |
| CDY37233 | Canola | plastid | 29.52 | 32.8 |
| CDY66855 | Canola | plastid | 29.52 | 32.8 |
| CDY19196 | Canola | cytosol | 27.62 | 32.77 |
| CDY31433 | Canola | cytosol, plastid | 28.57 | 32.61 |
| CDX76451 | Canola | cytosol, plastid | 28.57 | 32.61 |
| CDX83860 | Canola | cytosol | 26.67 | 31.64 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 28.57 | 27.65 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 27.62 | 27.23 |
| CDX98672 | Canola | cytosol | 32.38 | 26.77 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 27.14 | 26.76 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 27.62 | 26.73 |
| CDY60169 | Canola | cytosol, plastid | 24.29 | 24.52 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 30.48 | 23.62 |
| CDY00910 | Canola | cytosol, plastid | 23.81 | 22.94 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078GZ23 | UniProt:A0A078GZ23 | EnsemblPlants:CDY30399 | ProteinID:CDY30399 |
| ProteinID:CDY30399.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00045095001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0004EEDB7F |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g25000DBnaA04g25000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ23]
Coordinates
chrLK032253:-:138861..139549
Molecular Weight (calculated)
23545.9 Da
IEP (calculated)
4.458
GRAVY (calculated)
-0.466
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRIFLLYNL LNSFLLSLVP KKLRTLFTLS WFDKTPHKNS SMSLSPSPSS APSIKTDPTE LKRVFQTFDK NGDGRITKTE LNDSLENLGI YIPDQELTQM
101: IHNIDANGDG CVDIDEFESL YSSIVDEHRK DGETEEEDMK DAFNVFDQDG DGFITVEELK SVMGSLGLKQ GKTLEGCKKM IMQVDGDGDG RVNYKEFLQM
201: MKGGGFSCSN
101: IHNIDANGDG CVDIDEFESL YSSIVDEHRK DGETEEEDMK DAFNVFDQDG DGFITVEELK SVMGSLGLKQ GKTLEGCKKM IMQVDGDGDG RVNYKEFLQM
201: MKGGGFSCSN
001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN
Arabidopsis Description
CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.