Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96150 | Canola | cytosol | 98.69 | 98.69 |
| AT1G66400.1 | Thale cress | cytosol | 80.39 | 78.34 |
| CDY27652 | Canola | cytosol | 80.39 | 77.36 |
| CDX99691 | Canola | cytosol | 79.74 | 77.22 |
| KRH30955 | Soybean | cytosol | 54.25 | 60.58 |
| KRG97926 | Soybean | cytosol | 52.94 | 58.27 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 54.25 | 55.33 |
| KRH73006 | Soybean | cytosol | 50.98 | 55.32 |
| PGSC0003DMT400026987 | Potato | cytosol | 52.29 | 55.17 |
| Solyc02g063350.1.1 | Tomato | cytosol | 51.63 | 54.48 |
| KRH17370 | Soybean | cytosol | 49.02 | 53.19 |
| Solyc02g091500.1.1 | Tomato | cytosol | 53.59 | 52.56 |
| PGSC0003DMT400078654 | Potato | cytosol | 52.94 | 51.92 |
| CDX72996 | Canola | cytosol | 43.79 | 42.14 |
| CDX96488 | Canola | cytosol | 43.79 | 42.14 |
| CDY60818 | Canola | cytosol | 40.52 | 41.61 |
| CDY70127 | Canola | cytosol | 45.1 | 41.32 |
| CDY33702 | Canola | cytosol | 39.87 | 40.13 |
| CDY39714 | Canola | cytosol | 39.87 | 40.13 |
| CDY63788 | Canola | cytosol | 39.22 | 39.74 |
| CDX86544 | Canola | cytosol | 39.22 | 39.74 |
| CDX74043 | Canola | cytosol | 39.22 | 39.22 |
| CDY07993 | Canola | cytosol | 39.22 | 39.22 |
| CDY19196 | Canola | cytosol | 45.1 | 38.98 |
| CDX83860 | Canola | cytosol | 44.44 | 38.42 |
| CDX96729 | Canola | cytosol | 43.14 | 37.93 |
| CDY40786 | Canola | cytosol | 43.79 | 36.41 |
| CDY03874 | Canola | cytosol | 43.79 | 36.41 |
| CDX90890 | Canola | cytosol | 35.95 | 35.71 |
| CDY22119 | Canola | cytosol | 35.29 | 35.53 |
| CDY21953 | Canola | cytosol | 35.29 | 35.53 |
| CDY66855 | Canola | plastid | 43.14 | 34.92 |
| CDY37233 | Canola | plastid | 43.14 | 34.92 |
| CDX84967 | Canola | cytosol | 41.18 | 33.33 |
| CDY36129 | Canola | cytosol | 40.52 | 33.16 |
| CDY27574 | Canola | cytosol | 41.18 | 32.98 |
| CDY17950 | Canola | cytosol | 33.99 | 31.33 |
| CDY30399 | Canola | extracellular | 41.83 | 30.48 |
| CDY23356 | Canola | vacuole | 41.83 | 30.33 |
| CDY06002 | Canola | extracellular, vacuole | 39.22 | 30.3 |
| CDX83488 | Canola | extracellular | 41.83 | 29.91 |
| CDX98375 | Canola | endoplasmic reticulum | 39.87 | 29.9 |
| CDX67796 | Canola | vacuole | 39.22 | 29.56 |
| CDY72611 | Canola | extracellular, vacuole | 38.56 | 29.5 |
| CDY14927 | Canola | cytosol | 33.33 | 28.02 |
| CDY49013 | Canola | cytosol | 32.03 | 26.92 |
| CDX94789 | Canola | cytosol | 32.03 | 26.92 |
| CDX94006 | Canola | cytosol | 32.68 | 26.88 |
| CDX96968 | Canola | cytosol | 33.33 | 26.42 |
| CDX79002 | Canola | cytosol | 32.03 | 26.06 |
| CDY31433 | Canola | cytosol, plastid | 30.72 | 25.54 |
| CDX76451 | Canola | cytosol, plastid | 30.72 | 25.54 |
| CDX82773 | Canola | cytosol | 31.37 | 25.13 |
| CDY06925 | Canola | cytosol, mitochondrion, plastid | 34.64 | 24.42 |
| CDY14768 | Canola | cytosol, mitochondrion, plastid | 34.64 | 24.42 |
| CDX79938 | Canola | cytosol, mitochondrion, plastid | 33.99 | 24.41 |
| CDY23852 | Canola | cytosol, mitochondrion, plastid | 33.99 | 24.41 |
| CDY60169 | Canola | cytosol, plastid | 32.03 | 23.56 |
| CDY00910 | Canola | cytosol, plastid | 33.33 | 23.39 |
| CDY24421 | Canola | endoplasmic reticulum, golgi | 40.52 | 22.88 |
| CDY44217 | Canola | endoplasmic reticulum, golgi | 41.83 | 22.7 |
| CDX98672 | Canola | cytosol | 33.99 | 20.47 |
Protein Annotations
| EnsemblPlants:CDY55679 | EnsemblPlantsGene:GSBRNA2T00017189001 | Gene3D:1.10.238.10 | GO:A0A078J1F1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF573 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY55679 | ProteinID:CDY55679.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EB825C | UniProt:A0A078J1F1 | MapMan:35.1 | : |
Description
BnaC06g43540DBnaC06g43540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1F1]
Coordinates
chrLK033420:+:33495..37276
Molecular Weight (calculated)
17019.1 Da
IEP (calculated)
4.217
GRAVY (calculated)
-0.456
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSGRYCLG SMEDIRAVFQ RFDKNGDGKI SIDELKDVIG ALSPTASPEE TTLMMKEFDL DGNGYIDMDE FVALFQTEDG GDIRDLKEAF DLYDLDGNGR
101: ISVNELHSVM KNLGEKCSVE DCKRIISKVD ADGDGCVNFE EFKKMMMNGR ATA
101: ISVNELHSVM KNLGEKCSVE DCKRIISKVD ADGDGCVNFE EFKKMMMNGR ATA
001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
Arabidopsis Description
CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.