Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 2
- vacuole 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078654 | Potato | cytosol | 96.15 | 96.15 |
| Solyc02g063350.1.1 | Tomato | cytosol | 71.15 | 76.55 |
| KRG97926 | Soybean | cytosol | 60.9 | 68.35 |
| KRH30955 | Soybean | cytosol | 58.97 | 67.15 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 64.1 | 66.67 |
| KRH17370 | Soybean | cytosol | 58.97 | 65.25 |
| KRH73006 | Soybean | cytosol | 58.97 | 65.25 |
| Bra004165.1-P | Field mustard | cytosol | 53.21 | 54.25 |
| CDX96150 | Canola | cytosol | 53.21 | 54.25 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 53.21 | 53.9 |
| CDY55679 | Canola | cytosol | 52.56 | 53.59 |
| CDX99691 | Canola | cytosol | 53.21 | 52.53 |
| CDY27652 | Canola | cytosol | 53.21 | 52.2 |
| AT5G37770.1 | Thale cress | cytosol | 53.85 | 52.17 |
| Bra025439.1-P | Field mustard | cytosol | 53.21 | 51.88 |
| AT1G66400.1 | Thale cress | cytosol | 51.92 | 51.59 |
| Solyc03g118810.1.1 | Tomato | cytosol | 53.21 | 50.61 |
| Solyc01g005370.2.1 | Tomato | cytosol | 47.44 | 43.02 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 39.1 | 40.67 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 49.36 | 40.31 |
| Solyc06g083000.1.1 | Tomato | cytosol | 38.46 | 40.27 |
| Solyc09g055880.1.1 | Tomato | cytosol | 37.82 | 39.33 |
| Solyc11g044920.1.1 | Tomato | cytosol | 26.92 | 34.71 |
| Solyc01g108190.2.1 | Tomato | plastid | 41.03 | 34.59 |
| Solyc02g065000.1.1 | Tomato | cytosol | 34.62 | 31.21 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 38.46 | 29.27 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 36.54 | 25.68 |
| Solyc04g018110.1.1 | Tomato | plastid | 37.82 | 24.38 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 30.77 | 24.12 |
Protein Annotations
| EnsemblPlants:Solyc02g091500.1.1 | EnsemblPlantsGene:Solyc02g091500.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF698 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00027679A0 |
| UniProt:K4BCU8 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:52780166..52780636
Molecular Weight (calculated)
17133.3 Da
IEP (calculated)
4.693
GRAVY (calculated)
-0.543
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTPSDSKQ PAVSSAEMDG VEKVFRKFDA NGDGKISLSE LGAILNALGS KTSPDEVNRI MLEVDTDGDG FIDLKEFAAF YCPRGADGDN KELREAFDLY
101: DKDKNGKITA AELHSVMKSL GEKCSLKDCR RMISKVDVDG DGCVNFEEFK KMMSRT
101: DKDKNGKITA AELHSVMKSL GEKCSLKDCR RMISKVDVDG DGCVNFEEFK KMMSRT
001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
Arabidopsis Description
CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.