CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025439.1-P	Field mustard	cytosol	100.0	99.38
CDX99691	Canola	cytosol	98.74	99.37
AT5G37770.1	Thale cress	cytosol	86.79	85.71
CDY55679	Canola	cytosol	77.36	80.39
CDX96150	Canola	cytosol	77.36	80.39
KRH30955	Soybean	cytosol	50.94	59.12
KRG97926	Soybean	cytosol	50.94	58.27
KRH73006	Soybean	cytosol	50.31	56.74
PGSC0003DMT400026987	Potato	cytosol	50.94	55.86
KRH17370	Soybean	cytosol	49.06	55.32
Solyc02g063350.1.1	Tomato	cytosol	49.69	54.48
VIT_14s0006g01400.t01	Wine grape	cytosol	50.31	53.33
Solyc02g091500.1.1	Tomato	cytosol	52.2	53.21
PGSC0003DMT400078654	Potato	cytosol	52.2	53.21
CDY39714	Canola	cytosol	41.51	43.42
CDY33702	Canola	cytosol	40.88	42.76
CDX72996	Canola	cytosol	42.14	42.14
CDX96488	Canola	cytosol	42.14	42.14
CDX86544	Canola	cytosol	38.99	41.06
CDY63788	Canola	cytosol	38.99	41.06
CDY70127	Canola	cytosol	42.14	40.12
CDY60818	Canola	cytosol	37.11	39.6
CDY22119	Canola	cytosol	37.11	38.82
CDY21953	Canola	cytosol	36.48	38.16
CDY07993	Canola	cytosol	36.48	37.91
CDY19196	Canola	cytosol	42.14	37.85
CDX74043	Canola	cytosol	35.85	37.25
CDY03874	Canola	cytosol	42.77	36.96
CDY40786	Canola	cytosol	42.77	36.96
CDY37233	Canola	plastid	43.4	36.51
CDY66855	Canola	plastid	43.4	36.51
CDX83860	Canola	cytosol	40.25	36.16
CDX90890	Canola	cytosol	34.59	35.71
CDX96729	Canola	cytosol	38.99	35.63
CDY36129	Canola	cytosol	40.25	34.22
CDX84967	Canola	cytosol	40.25	33.86
CDY27574	Canola	cytosol	40.25	33.51
CDY17950	Canola	cytosol	32.7	31.33
CDY30399	Canola	extracellular	40.88	30.95
CDY06002	Canola	extracellular, vacuole	38.36	30.81
CDY23356	Canola	vacuole	40.88	30.81
CDY72611	Canola	extracellular, vacuole	38.36	30.5
CDX83488	Canola	extracellular	40.88	30.37
CDY14927	Canola	cytosol	33.96	29.67
CDX67796	Canola	vacuole	37.74	29.56
CDX98375	Canola	endoplasmic reticulum	37.74	29.41
CDY49013	Canola	cytosol	33.33	29.12
CDX94789	Canola	cytosol	33.33	29.12
CDX94006	Canola	cytosol	33.96	29.03
CDX82773	Canola	cytosol	33.96	28.27
CDX79002	Canola	cytosol	33.33	28.19
CDX96968	Canola	cytosol	33.96	27.98
CDX79938	Canola	cytosol, mitochondrion, plastid	35.85	26.76
CDY23852	Canola	cytosol, mitochondrion, plastid	35.85	26.76
CDY31433	Canola	cytosol, plastid	30.82	26.63
CDX76451	Canola	cytosol, plastid	30.82	26.63
CDY06925	Canola	cytosol, mitochondrion, plastid	34.59	25.35
CDY14768	Canola	cytosol, mitochondrion, plastid	33.96	24.88
CDY60169	Canola	cytosol, plastid	32.08	24.52
CDY00910	Canola	cytosol, plastid	33.33	24.31
CDY24421	Canola	endoplasmic reticulum, golgi	40.25	23.62
CDY44217	Canola	endoplasmic reticulum, golgi	40.88	23.05
CDX98672	Canola	cytosol	34.59	21.65

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078GR73	UniProt:A0A078GR73	EnsemblPlants:CDY27652	ProteinID:CDY27652
ProteinID:CDY27652.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	EnsemblPlantsGene:GSBRNA2T00038416001	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF573	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EDCA47	SEG:seg

Description

BnaUnng00020DBnaUnng00020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR73]

Coordinates

chrLK032208:+:12541..13020

Molecular Weight (calculated)

17450.7 Da

IEP (calculated)

4.639

GRAVY (calculated)

-0.541

Length

159 amino acids

Sequence
(BLAST)

001: MSKSNGARSC LGSMDDIRRV FQRFDKNGDG KISVDELKEV IRALSPTASP EETVKMMKQF DLDGNGFIDM DEFVSLFQIG VNQGGGGGNS KNDLKEAFEL
101: YDLDGNGRIS AKELHSVMKN LGEKCSVQDC RKMISKVDTD GDGCVNFEEF KLMMNNGGA

Best Arabidopsis Sequence Match ( AT5G37770.1 )
(BLAST)

001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A

Arabidopsis Description

CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.