Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026987 | Potato | cytosol | 94.48 | 94.48 |
| Solyc02g091500.1.1 | Tomato | cytosol | 76.55 | 71.15 |
| KRH73006 | Soybean | cytosol | 64.83 | 66.67 |
| KRH17370 | Soybean | cytosol | 64.14 | 65.96 |
| KRH30955 | Soybean | cytosol | 62.07 | 65.69 |
| KRG97926 | Soybean | cytosol | 62.76 | 65.47 |
| VIT_14s0006g01400.t01 | Wine grape | cytosol | 67.59 | 65.33 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 55.86 | 52.6 |
| CDX96150 | Canola | cytosol | 55.17 | 52.29 |
| Bra004165.1-P | Field mustard | cytosol | 55.17 | 52.29 |
| AT1G66400.1 | Thale cress | cytosol | 56.55 | 52.23 |
| CDY55679 | Canola | cytosol | 54.48 | 51.63 |
| CDX99691 | Canola | cytosol | 54.48 | 50.0 |
| CDY27652 | Canola | cytosol | 54.48 | 49.69 |
| Solyc03g118810.1.1 | Tomato | cytosol | 55.86 | 49.39 |
| Bra025439.1-P | Field mustard | cytosol | 54.48 | 49.38 |
| AT5G37770.1 | Thale cress | cytosol | 54.48 | 49.07 |
| Solyc01g005370.2.1 | Tomato | cytosol | 52.41 | 44.19 |
| Solyc04g008000.2.1 | Tomato | cytosol, plastid | 51.03 | 38.74 |
| Solyc05g050750.1.1 | Tomato | cytosol, unclear | 37.93 | 36.67 |
| Solyc06g083000.1.1 | Tomato | cytosol | 37.24 | 36.24 |
| Solyc09g055880.1.1 | Tomato | cytosol | 37.24 | 36.0 |
| Solyc01g108190.2.1 | Tomato | plastid | 42.76 | 33.51 |
| Solyc11g044920.1.1 | Tomato | cytosol | 27.59 | 33.06 |
| Solyc02g065000.1.1 | Tomato | cytosol | 37.24 | 31.21 |
| Solyc10g079420.1.1 | Tomato | nucleus, plastid | 40.0 | 28.29 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 40.69 | 26.58 |
| Solyc10g074740.1.1 | Tomato | cytosol, plastid | 34.48 | 25.13 |
| Solyc04g018110.1.1 | Tomato | plastid | 37.24 | 22.31 |
Protein Annotations
| EnsemblPlants:Solyc02g063350.1.1 | EnsemblPlantsGene:Solyc02g063350.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF698 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002768664 | UniProt:K4B6M0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2:+:35414697..35415134
Molecular Weight (calculated)
16158.1 Da
IEP (calculated)
4.691
GRAVY (calculated)
-0.649
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLTPRMKE VEKVFRKYDT NGDGKISLSE LDGVLNALGT KTTPDEAKRM MLEVDTDGDG FIDLEEFAAF HCPVEGSNSK DLRDAFDLYD KDKNGKISAS
101: ELHSVMKGIG EKCSLKDCRR MISSVDDDGD GSVNFEEFKK MMTRA
101: ELHSVMKGIG EKCSLKDCRR MISSVDDDGD GSVNFEEFKK MMTRA
001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA
Arabidopsis Description
CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.