Factsheet for Solyc11g044920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29625	Soybean	cytosol	53.72	61.32
Bra035972.1-P	Field mustard	cytosol	56.2	61.26
AT1G05990.1	Thale cress	cytosol	69.42	56.0
Solyc06g083000.1.1	Tomato	cytosol	66.94	54.36
CDY63788	Canola	cytosol	67.77	54.3
CDX86544	Canola	cytosol	67.77	54.3
Solyc05g050750.1.1	Tomato	cytosol, unclear	65.29	52.67
Solyc09g055880.1.1	Tomato	cytosol	63.64	51.33
CDY22119	Canola	cytosol	62.81	50.0
CDY21953	Canola	cytosol	61.98	49.34
Bra000836.1-P	Field mustard	cytosol	61.98	48.7
CDX90890	Canola	cytosol	61.98	48.7
AT4G03290.1	Thale cress	cytosol	61.16	48.05
Bra034870.1-P	Field mustard	cytosol	63.64	45.56
Bra037722.1-P	Field mustard	cytosol	63.64	45.56
Bra019554.1-P	Field mustard	cytosol	63.64	45.56
KRH23209	Soybean	cytosol, mitochondrion	65.29	42.93
CDY17950	Canola	cytosol	58.68	42.77
KRH10131	Soybean	endoplasmic reticulum	68.59	39.34
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	68.59	38.78
PGSC0003DMT400069195	Potato	golgi, plastid	69.42	38.36
CDY30399	Canola	extracellular	63.64	36.67
CDY23356	Canola	vacuole	63.64	36.49
AT3G59440.1	Thale cress	endoplasmic reticulum, extracellular	55.37	34.36
CDX83488	Canola	extracellular	60.33	34.11
CDY72611	Canola	extracellular, vacuole	56.2	34.0
AT2G43290.1	Thale cress	extracellular	60.33	33.95
CDY06002	Canola	extracellular, vacuole	55.37	33.84
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	55.37	33.84
CDX67796	Canola	vacuole	56.2	33.5
Bra003376.1-P	Field mustard	vacuole	56.2	33.5
KRH24625	Soybean	cytosol	61.16	33.48
CDX98375	Canola	endoplasmic reticulum	56.2	33.33
Solyc02g063350.1.1	Tomato	cytosol	33.06	27.59
CDY44217	Canola	endoplasmic reticulum, golgi	62.81	26.95
Solyc02g091500.1.1	Tomato	cytosol	34.71	26.92
Solyc03g118810.1.1	Tomato	cytosol	34.71	25.61
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	32.23	25.32
Solyc01g005370.2.1	Tomato	cytosol	35.54	25.0
Solyc02g065000.1.1	Tomato	cytosol	35.54	24.86
Solyc07g007950.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	44.63	24.32
Solyc10g074740.1.1	Tomato	cytosol, plastid	39.67	24.12
Solyc04g008000.2.1	Tomato	cytosol, plastid	38.02	24.08
Solyc01g108190.2.1	Tomato	plastid	34.71	22.7
Solyc10g079420.1.1	Tomato	nucleus, plastid	32.23	19.02
Solyc04g018110.1.1	Tomato	plastid	30.58	15.29

Protein Annotations

EnsemblPlants:Solyc11g044920.1.1	EnsemblPlantsGene:Solyc11g044920.1	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891	PANTHER:PTHR10891:SF546
PFAM:PF00036	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000276A5E4	UniProt:K4D8F7	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr11:+:32033863..32034228

Molecular Weight (calculated)

13671.1 Da

IEP (calculated)

3.669

GRAVY (calculated)

-0.307

Length

121 amino acids

Sequence
(BLAST)

001: MGIYIPDCEL GQMIQNIDVN GDGYVDFDEF SALFKMIFMD DDEDEDEDMQ EAFNVFDQNG DGFITVDELK SVLGSLGLKQ GGNVEDCKKM INNVDVDGDG
101: RIDFMEFKRM MMRGVGFANF T

Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)

001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL

Arabidopsis Description

CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.