Factsheet for Bra035972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29625	Soybean	cytosol	67.57	70.75
Bra037722.1-P	Field mustard	cytosol	100.0	65.68
Bra034870.1-P	Field mustard	cytosol	100.0	65.68
Bra019554.1-P	Field mustard	cytosol	100.0	65.68
Solyc11g044920.1.1	Tomato	cytosol	61.26	56.2
CDY23356	Canola	vacuole	99.1	52.13
Bra001254.1-P	Field mustard	cytosol	68.47	49.67
AT2G43290.1	Thale cress	extracellular	93.69	48.37
Bra000836.1-P	Field mustard	cytosol	66.67	48.05
Bra032677.1-P	Field mustard	cytosol	63.06	46.05
Bra034907.1-P	Field mustard	cytosol	63.06	46.05
Solyc05g050750.1.1	Tomato	cytosol, unclear	61.26	45.33
PGSC0003DMT400018016	Potato	cytosol	61.26	45.33
Bra040379.1-P	Field mustard	cytosol	60.36	44.97
Bra003376.1-P	Field mustard	vacuole	80.18	43.84
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	77.48	43.43
Bra016936.1-P	Field mustard	cytosol	35.14	37.14
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	67.57	35.05
PGSC0003DMT400069195	Potato	golgi, plastid	66.67	33.79
Bra032785.1-P	Field mustard	cytosol	38.74	33.59
KRH24625	Soybean	cytosol	66.67	33.48
Bra004165.1-P	Field mustard	cytosol	40.54	29.41
Bra025439.1-P	Field mustard	cytosol	40.54	28.12
Bra010974.1-P	Field mustard	cytosol	39.64	23.53
Bra025924.1-P	Field mustard	cytosol	35.14	23.35
Bra012497.1-P	Field mustard	cytosol	37.84	22.83
Bra039511.1-P	Field mustard	cytosol	36.94	22.53
Bra016564.1-P	Field mustard	cytosol	35.14	22.41
Bra033745.1-P	Field mustard	cytosol	35.14	21.43
Bra015979.1-P	Field mustard	cytosol	30.63	21.38
Bra013470.1-P	Field mustard	cytosol	35.14	20.74
Bra020916.1-P	Field mustard	cytosol, plastid	34.23	20.65
Bra039845.1-P	Field mustard	plastid	35.14	20.63
Bra029821.1-P	Field mustard	plastid	34.23	18.27
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	34.23	17.84
Bra038801.1-P	Field mustard	cytosol	39.64	16.86

Protein Annotations

EnsemblPlants:Bra035972.1	EnsemblPlants:Bra035972.1-P	EnsemblPlantsGene:Bra035972	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	PFAM:PF13202	PFAM:PF13499	PFscan:PS50222	PRINTS:PR01697	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000253E64D	UniProt:M4F4H2	MapMan:35.1	:

Description

AT2G43290 (E=3e-057) MSS3 | MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding

Coordinates

chrScaffold000111:+:116499..116834

Molecular Weight (calculated)

12273.3 Da

IEP (calculated)

4.041

GRAVY (calculated)

-0.589

Length

111 amino acids

Sequence
(BLAST)

001: MIHNIDANGD GCVDIDEFES LYSSIVDEHR KDGETEEEDM KDAFNVFDQD GDGFITVEEL KSVMGSLGLK QGKTLEGCKK MIMQVDGDGD GRVNYKEFLQ
101: MMKGGGFSCS N

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.