Factsheet for Bra039845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37233	Canola	plastid	99.47	99.47
CDY66855	Canola	plastid	97.88	97.88
AT2G15680.1	Thale cress	plastid	86.77	87.7
KRH50269	Soybean	mitochondrion	59.79	61.08
KRH71148	Soybean	cytosol	58.73	60.0
VIT_03s0063g00530.t01	Wine grape	cytosol	57.67	59.89
Solyc01g108190.2.1	Tomato	plastid	50.26	51.35
HORVU5Hr1G068490.1	Barley	cytosol	23.28	51.16
PGSC0003DMT400066610	Potato	plastid	48.68	49.73
Bra004165.1-P	Field mustard	cytosol	35.45	43.79
Bra025439.1-P	Field mustard	cytosol	36.51	43.12
EER96860	Sorghum	cytosol, mitochondrion	41.27	42.39
Zm00001d020722_P001	Maize	cytosol, mitochondrion	40.21	41.3
TraesCS5A01G238900.1	Wheat	mitochondrion	38.62	39.89
Os09t0458700-01	Rice	cytosol, mitochondrion	38.62	39.46
TraesCS5B01G237500.1	Wheat	mitochondrion	37.57	38.8
TraesCS5D01G246000.1	Wheat	mitochondrion	37.57	38.8
Bra001254.1-P	Field mustard	cytosol	30.16	37.25
Bra040379.1-P	Field mustard	cytosol	29.1	36.91
Bra025924.1-P	Field mustard	cytosol	32.28	36.53
Bra032677.1-P	Field mustard	cytosol	29.1	36.18
GSMUA_Achr9P27060_001	Banana	plastid	37.57	36.04
Bra016936.1-P	Field mustard	cytosol	19.58	35.24
Bra015979.1-P	Field mustard	cytosol	29.63	35.22
Bra035972.1-P	Field mustard	cytosol	20.63	35.14
Bra000836.1-P	Field mustard	cytosol	28.57	35.06
Bra016564.1-P	Field mustard	cytosol	32.28	35.06
Bra034907.1-P	Field mustard	cytosol	28.04	34.87
Bra037722.1-P	Field mustard	cytosol	29.63	33.14
Bra034870.1-P	Field mustard	cytosol	29.63	33.14
Bra019554.1-P	Field mustard	cytosol	29.63	33.14
Bra032785.1-P	Field mustard	cytosol	22.22	32.81
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	31.75	30.3
Bra010974.1-P	Field mustard	cytosol	29.63	29.95
Bra012497.1-P	Field mustard	cytosol	29.1	29.89
Bra033745.1-P	Field mustard	cytosol	28.04	29.12
Bra039511.1-P	Field mustard	cytosol	28.04	29.12
Bra003376.1-P	Field mustard	vacuole	31.22	29.06
Bra013470.1-P	Field mustard	cytosol	28.57	28.72
Bra020916.1-P	Field mustard	cytosol, plastid	26.98	27.72
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	31.22	27.7
Bra029821.1-P	Field mustard	plastid	29.1	26.44
Bra038801.1-P	Field mustard	cytosol	29.63	21.46

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EnsemblPlantsGene:Bra039845	EnsemblPlants:Bra039845.1	EnsemblPlants:Bra039845.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	InterPro:IPR002048	UniProt:M4FFH1
PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000253EB20	SEG:seg	:	:

Description

AT2G15680 (E=6e-082) | calmodulin-related protein, putative

Coordinates

chrScaffold000178:+:202553..203122

Molecular Weight (calculated)

21519.9 Da

IEP (calculated)

9.182

GRAVY (calculated)

-0.517

Length

189 amino acids

Sequence
(BLAST)

001: MSNVNFLELQ YKLSKNKMLR KPSRLFSRDR QSSGLSSPGP VGVPQPTINE MRRVFNRFDS DKDGKISQTE YKVVLRALGQ ERAIQDVPKI FKAADLDGDG
101: FIDFKEFIDA HKRSGGIRSL DIRNAFWTFD LNGDGKISAE EVMSVLRKLG ERCNLEDCKR MVRAVDADGD GLVNMEEFMR MMTQSMNIV

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.