Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039845.1-P | Field mustard | plastid | 87.7 | 86.77 |
| CDY37233 | Canola | plastid | 87.17 | 86.24 |
| CDY66855 | Canola | plastid | 86.63 | 85.71 |
| KRH50269 | Soybean | mitochondrion | 59.36 | 60.0 |
| KRH71148 | Soybean | cytosol | 57.75 | 58.38 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 55.62 | 57.14 |
| Solyc01g108190.2.1 | Tomato | plastid | 50.8 | 51.35 |
| PGSC0003DMT400066610 | Potato | plastid | 49.2 | 49.73 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 21.39 | 46.51 |
| AT5G37770.1 | Thale cress | cytosol | 36.36 | 42.24 |
| AT1G66400.1 | Thale cress | cytosol | 34.76 | 41.4 |
| EER96860 | Sorghum | cytosol, mitochondrion | 40.64 | 41.3 |
| TraesCS5A01G238900.1 | Wheat | mitochondrion | 36.9 | 37.7 |
| Zm00001d020722_P001 | Maize | cytosol, mitochondrion | 36.9 | 37.5 |
| AT1G73630.1 | Thale cress | cytosol | 32.62 | 37.42 |
| Os09t0458700-01 | Rice | cytosol, mitochondrion | 36.9 | 37.3 |
| AT3G07490.1 | Thale cress | cytosol | 30.48 | 37.25 |
| TraesCS5D01G246000.1 | Wheat | mitochondrion | 35.83 | 36.61 |
| TraesCS5B01G237500.1 | Wheat | mitochondrion | 35.83 | 36.61 |
| AT1G05990.1 | Thale cress | cytosol | 28.88 | 36.0 |
| AT4G12860.1 | Thale cress | cytosol | 28.88 | 35.53 |
| AT1G18210.1 | Thale cress | cytosol | 32.09 | 35.29 |
| AT4G03290.1 | Thale cress | cytosol | 28.88 | 35.06 |
| GSMUA_Achr9P27060_001 | Banana | plastid | 36.9 | 35.03 |
| AT5G44460.1 | Thale cress | cytosol | 29.41 | 30.39 |
| AT3G59440.1 | Thale cress | endoplasmic reticulum, extracellular | 31.02 | 29.74 |
| AT1G24620.1 | Thale cress | cytosol | 28.88 | 29.03 |
| AT2G43290.1 | Thale cress | extracellular | 33.16 | 28.84 |
| AT4G20780.1 | Thale cress | cytosol | 28.88 | 28.27 |
| AT2G41410.1 | Thale cress | cytosol, mitochondrion, plastid | 30.48 | 26.39 |
| AT3G10190.1 | Thale cress | cytosol, mitochondrion | 29.41 | 26.32 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:816061 | UniProt:A0A178VPG8 | ProteinID:AAD17412.1 | ProteinID:AEC06429.1 |
| ArrayExpress:AT2G15680 | EnsemblPlantsGene:AT2G15680 | RefSeq:AT2G15680 | TAIR:AT2G15680 | RefSeq:AT2G15680-TAIR-G | EnsemblPlants:AT2G15680.1 |
| TAIR:AT2G15680.1 | EMBL:AY128375 | EMBL:BT006571 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_179170.1 |
| ProteinID:OAP07115.1 | PFAM:PF13499 | PO:PO:0000005 | PO:PO:0000230 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00450 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF620 | UniProt:Q9ZQE6 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000009D736 | SEG:seg | : | : |
Description
CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
Coordinates
chr2:+:6830995..6831641
Molecular Weight (calculated)
21221.3 Da
IEP (calculated)
6.750
GRAVY (calculated)
-0.510
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.