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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96488 Canola cytosol 82.82 84.91
CDX72996 Canola cytosol 82.82 84.91
Bra015979.1-P Field mustard cytosol 82.82 84.91
AT1G18210.1 Thale cress cytosol 71.17 68.24
KRH41828 Soybean cytosol 55.83 50.56
PGSC0003DMT400074098 Potato cytosol 46.63 49.35
Solyc06g068960.1.1 Tomato endoplasmic reticulum, unclear 46.63 49.35
KRH24162 Soybean cytosol 41.1 47.86
PGSC0003DMT400014742 Potato cytosol 47.85 47.56
Solyc03g118810.1.1 Tomato cytosol 47.24 46.95
KRH02767 Soybean cytosol 41.72 44.74
KRH48613 Soybean cytosol 49.08 44.69
TraesCS1A01G134000.1 Wheat cytosol 44.79 42.44
KRH15405 Soybean cytosol 37.42 42.36
AT1G66400.1 Thale cress cytosol 40.49 42.04
TraesCS1B01G148000.1 Wheat cytosol 44.17 41.86
TraesCS1D01G125800.1 Wheat cytosol 44.17 41.86
KRH16247 Soybean cytosol 32.52 40.46
AT5G37770.1 Thale cress cytosol 39.88 40.37
KRH60530 Soybean plastid 53.37 40.28
EES19251 Sorghum cytosol 43.56 39.66
Os05t0223000-01 Rice plasma membrane 43.56 37.57
AT4G12860.1 Thale cress cytosol 34.97 37.5
GSMUA_Achr8P17950_001 Banana cytosol, plastid 40.49 37.29
AT1G24620.1 Thale cress cytosol 41.1 36.02
AT3G07490.1 Thale cress cytosol 33.74 35.95
TraesCS3D01G041500.1 Wheat cytosol 40.49 35.68
TraesCS3A01G038300.1 Wheat cytosol 40.49 35.48
HORVU3Hr1G007420.1 Barley cytosol 40.49 35.48
GSMUA_Achr11P... Banana cytosol, plastid 37.42 35.47
Os01t0135700-01 Rice plasma membrane 39.26 35.36
AT1G05990.1 Thale cress cytosol 32.52 35.33
TraesCS3B01G045500.1 Wheat cytosol 40.49 35.29
AT4G03290.1 Thale cress cytosol 33.13 35.06
HORVU4Hr1G081250.1 Barley cytosol 12.88 34.43
AT2G15680.1 Thale cress plastid 37.42 32.62
HORVU1Hr1G029850.1 Barley cytosol 44.79 32.02
HORVU1Hr1G074240.1 Barley cytosol, plastid 28.22 30.67
HORVU6Hr1G076690.1 Barley cytosol 28.22 30.67
EES00360 Sorghum cytosol 38.65 30.58
HORVU7Hr1G101640.1 Barley cytosol, plastid 28.22 30.26
GSMUA_Achr6P09820_001 Banana cytosol 47.85 29.89
HORVU6Hr1G034200.1 Barley cytosol, plastid 28.83 29.56
HORVU5Hr1G018360.1 Barley cytosol, plastid 26.99 29.14
Zm00001d008573_P001 Maize plastid 36.2 28.78
Zm00001d039944_P001 Maize cytosol, plastid 34.36 28.72
HORVU7Hr1G029640.1 Barley cytosol, plastid 27.61 28.66
HORVU0Hr1G031990.1 Barley cytosol, plastid 26.99 27.85
HORVU4Hr1G085560.1 Barley cytosol, plastid 30.06 27.68
HORVU1Hr1G023720.1 Barley cytosol, plastid 26.99 27.5
TraesCS3D01G041400.1 Wheat cytosol, plastid 39.88 27.31
HORVU4Hr1G032570.1 Barley cytosol, plastid 24.54 26.67
AT3G10190.1 Thale cress cytosol, mitochondrion 33.74 26.32
AT5G44460.1 Thale cress cytosol 28.83 25.97
HORVU5Hr1G077930.1 Barley cytosol 23.31 25.5
AT3G59440.1 Thale cress endoplasmic reticulum, extracellular 30.06 25.13
HORVU5Hr1G117570.1 Barley cytosol 19.63 24.62
AT4G20780.1 Thale cress cytosol 28.83 24.61
AT2G43290.1 Thale cress extracellular 30.67 23.26
AT2G41410.1 Thale cress cytosol, mitochondrion, plastid 30.67 23.15
HORVU5Hr1G073590.1 Barley cytosol, plastid 20.25 18.13
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:843697ProteinID:AAG52088.1ProteinID:AEE35487.1ArrayExpress:AT1G73630
EnsemblPlantsGene:AT1G73630RefSeq:AT1G73630TAIR:AT1G73630RefSeq:AT1G73630-TAIR-GEnsemblPlants:AT1G73630.1TAIR:AT1G73630.1
EMBL:AY088760EMBL:BT025517InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674
GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0046872InterPro:IPR002048RefSeq:NP_177504.1PFAM:PF13499PO:PO:0000005
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025195PO:PO:0025281ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR10891PANTHER:PTHR10891:SF698
UniProt:Q9C9U8SMART:SM00054SUPFAM:SSF47473UniParc:UPI00000A6A83::
Description
CML26Probable calcium-binding protein CML26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U8]
Coordinates
chr1:+:27684673..27685614
Molecular Weight (calculated)
18002.9 Da
IEP (calculated)
4.138
GRAVY (calculated)
-0.465
Length
163 amino acids
Sequence
(BLAST)
001: MANTNLESTN KSTTPSTDME LKKVFDKFDA NGDGKISVSE LGNVFKSMGT SYTEEELNRV LDEIDIDCDG FINQEEFATI CRSSSSAVEI REAFDLYDQN
101: KNGLISSSEI HKVLNRLGMT CSVEDCVRMI GHVDTDGDGN VNFEEFQKMM SSPELVKGTV ANS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.