Factsheet for Os01t0135700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G041500.1	Wheat	cytosol	71.82	70.27
HORVU3Hr1G007420.1	Barley	cytosol	71.82	69.89
TraesCS3B01G045500.1	Wheat	cytosol	71.27	68.98
HORVU4Hr1G081250.1	Barley	cytosol	23.2	68.85
TraesCS3A01G038300.1	Wheat	cytosol	70.17	68.28
EES00360	Sorghum	cytosol	76.8	67.48
Zm00001d039944_P001	Maize	cytosol, plastid	70.17	65.13
Zm00001d008573_P001	Maize	plastid	72.38	63.9
HORVU7Hr1G029640.1	Barley	cytosol, plastid	51.38	59.24
HORVU1Hr1G074240.1	Barley	cytosol, plastid	48.62	58.67
HORVU7Hr1G101640.1	Barley	cytosol, plastid	49.17	58.55
HORVU5Hr1G018360.1	Barley	cytosol, plastid	48.62	58.28
HORVU6Hr1G076690.1	Barley	cytosol	47.51	57.33
HORVU6Hr1G034200.1	Barley	cytosol, plastid	50.28	57.23
HORVU1Hr1G023720.1	Barley	cytosol, plastid	49.72	56.25
HORVU4Hr1G032570.1	Barley	cytosol, plastid	46.41	56.0
HORVU5Hr1G117570.1	Barley	cytosol	38.67	53.85
TraesCS3D01G041400.1	Wheat	cytosol, plastid	70.72	53.78
HORVU0Hr1G031990.1	Barley	cytosol, plastid	46.41	53.16
HORVU5Hr1G077930.1	Barley	cytosol	43.65	53.02
HORVU4Hr1G085560.1	Barley	cytosol, plastid	51.38	52.54
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	40.33	47.4
PGSC0003DMT400074098	Potato	cytosol	39.78	46.75
Solyc03g118810.1.1	Tomato	cytosol	41.99	46.34
PGSC0003DMT400014742	Potato	cytosol	41.99	46.34
KRH24162	Soybean	cytosol	33.7	43.57
Os05t0223000-01	Rice	plasma membrane	43.65	41.8
KRH48613	Soybean	cytosol	40.88	41.34
KRH41828	Soybean	cytosol	40.88	41.11
CDX96488	Canola	cytosol	35.36	40.25
CDX72996	Canola	cytosol	35.36	40.25
Bra015979.1-P	Field mustard	cytosol	35.36	40.25
CDY70127	Canola	cytosol	37.02	40.12
Bra025924.1-P	Field mustard	cytosol	37.02	40.12
Os01t0949500-01	Rice	plasma membrane	40.33	39.46
AT1G73630.1	Thale cress	cytosol	35.36	39.26
HORVU5Hr1G073590.1	Barley	cytosol, plastid	39.23	39.01
AT1G18210.1	Thale cress	cytosol	36.46	38.82
Os05t0380900-01	Rice	cytosol, mitochondrion	43.09	38.81
KRH02767	Soybean	cytosol	32.04	38.16
CDX83860	Canola	cytosol	37.02	37.85
CDY19196	Canola	cytosol	37.02	37.85
KRH15405	Soybean	cytosol	29.83	37.5
Bra016564.1-P	Field mustard	cytosol	35.91	37.36
CDX96729	Canola	cytosol	35.36	36.78
KRH16247	Soybean	cytosol	24.86	34.35
Os12t0228800-01	Rice	cytosol	31.49	33.93
KRH60530	Soybean	plastid	39.78	33.33
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	35.36	32.65
Os08t0144100-01	Rice	plasma membrane	30.94	28.57
Os11t0141400-01	Rice	cytosol	29.28	28.19
Os03t0331700-02	Rice	plasma membrane	29.28	27.89
Os07t0681400-01	Rice	cytosol	29.83	27.41
Os05t0312600-01	Rice	cytosol, plastid	29.83	27.41
Os09t0458700-01	Rice	cytosol, mitochondrion	27.62	27.03
Os06t0172200-02	Rice	plasma membrane	34.81	26.69
Os01t0949300-01	Rice	plasma membrane	27.07	24.02
Os12t0138050-00	Rice	plastid	30.94	23.53

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4325693	EMBL:AK062711	ProteinID:BAD52815.1	ProteinID:BAF03864.2
ProteinID:BAS70257.1	ProteinID:EAZ10442.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0046872	InterPro:IPR002048	EnsemblPlantsGene:Os01g0135700	EnsemblPlants:Os01t0135700-01
PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF676	UniProt:Q5ZCK5
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0000446B71	RefSeq:XP_015620971.1	SEG:seg	:

Description

CALMODULIN-LIKE PROTEIN 16EF-HAND 2 domain containing protein. (Os01t0135700-01)

Coordinates

chr1:-:1931016..1931904

Molecular Weight (calculated)

19264.3 Da

IEP (calculated)

4.203

GRAVY (calculated)

-0.492

Length

181 amino acids

Sequence
(BLAST)

001: MSNTTEKKMP QQQQVERPTA LAPADAEIER VFTRFDADGD GRISPSELAA VTRAIAPPPS ESAGGREVAA MMNELDTDRD GFVDLGEFAA FHGRGRGDAE
101: HEAELRAAFD VYDVDGDGRI TAAELGKVLG RIGEGCSAEE CERMIASVDV DGDGCVGFEE FKKMMCRDAA ATGGADKAKT E

Best Arabidopsis Sequence Match ( AT5G37770.1 )
(BLAST)

001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A

Arabidopsis Description

CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.