Factsheet for Os05t0312600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 3
plasma membrane 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0122600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20780.1	Os02t0122600-00	AT2G46600.1	19720824

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G342800.1	Wheat	cytosol	59.9	72.84
TraesCS5A01G343000.1	Wheat	cytosol, mitochondrion	60.41	72.56
TraesCS5D01G348900.1	Wheat	cytosol	59.9	72.39
HORVU5Hr1G085800.2	Barley	cytosol	58.88	66.29
GSMUA_Achr8P01570_001	Banana	cytosol	46.19	49.19
Os03t0331700-02	Rice	plasma membrane	46.7	48.42
Os08t0144100-01	Rice	plasma membrane	45.69	45.92
CDX94006	Canola	cytosol	41.12	43.55
Os07t0681400-01	Rice	cytosol	43.15	43.15
AT5G44460.1	Thale cress	cytosol	39.59	43.09
AT4G20780.1	Thale cress	cytosol	41.62	42.93
CDY31433	Canola	cytosol, plastid	39.59	42.39
CDX76451	Canola	cytosol, plastid	39.09	41.85
Bra020916.1-P	Field mustard	cytosol, plastid	39.09	41.85
CDY14927	Canola	cytosol	38.58	41.76
Bra039511.1-P	Field mustard	cytosol	38.58	41.76
Bra013470.1-P	Field mustard	cytosol	39.59	41.49
CDX79002	Canola	cytosol	39.59	41.49
Bra033745.1-P	Field mustard	cytosol	37.56	40.66
CDX94789	Canola	cytosol	37.56	40.66
KRH40630	Soybean	mitochondrion	37.56	40.44
CDX82773	Canola	cytosol	39.09	40.31
CDY49013	Canola	cytosol	37.06	40.11
VIT_08s0056g00290.t01	Wine grape	cytosol, mitochondrion	39.09	40.1
CDX96968	Canola	cytosol	39.09	39.9
Solyc10g074740.1.1	Tomato	cytosol, plastid	39.59	39.2
PGSC0003DMT400071219	Potato	cytosol, plastid	39.09	38.69
Os04t0492800-01	Rice	cytosol, mitochondrion, nucleus, plastid	35.53	35.71
Os12t0228800-01	Rice	cytosol	30.46	35.71
CDX98672	Canola	cytosol	41.62	32.28
Os01t0949500-01	Rice	plasma membrane	29.95	31.89
Bra038801.1-P	Field mustard	cytosol	41.12	31.03
Os01t0135700-01	Rice	plasma membrane	27.41	29.83
Os06t0172200-02	Rice	plasma membrane	33.5	27.97
Os05t0380900-01	Rice	cytosol, mitochondrion	28.43	27.86
Os05t0223000-01	Rice	plasma membrane	26.4	27.51
Os09t0458700-01	Rice	cytosol, mitochondrion	24.87	26.49
Os11t0141400-01	Rice	cytosol	22.34	23.4
Os01t0949300-01	Rice	plasma membrane	23.35	22.55
Os12t0138050-00	Rice	plastid	22.84	18.91

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4338382	EMBL:AK243353	ProteinID:BAF17079.2	ProteinID:BAS93301.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0046872	InterPro:IPR002048	EnsemblPlantsGene:Os05g0312600	EnsemblPlants:Os05t0312600-01	PFAM:PF13405	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR45003	PANTHER:PTHR45003:SF1	UniProt:Q0DJ94	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI00017502D9	RefSeq:XP_015638475.1	SEG:seg	:	:

Description

CALMODULIN-LIKE PROTEIN 21EF-Hand type domain containing protein. (Os05t0312600-01)

Coordinates

chr5:-:14360753..14361588

Molecular Weight (calculated)

20771.7 Da

IEP (calculated)

4.563

GRAVY (calculated)

-0.120

Length

197 amino acids

Sequence
(BLAST)

001: MLRPPPPSSV LTASAAAARP PASVVQPQRQ AAHRRRAETL RLRRVFEMFD RDGDGVITPA ELSGALCRLG ARGEAPPAAA ALDAVVAAYI APGMAGLRFA
101: EFEALHAELA GLGGRQAVAA AEAEEEKEAD MREAFGVFDE DGDGYISAAE LQAVLSRMGL PEAACMARVR DMIAAADRDS DGRVDYEEFK AMMAAGN

Best Arabidopsis Sequence Match ( AT4G20780.1 )
(BLAST)

001: MESNNNEKKK VARQSSSFRL RSPSLNALRL QRIFDLFDKN GDGFITVEEL SQALTRLGLN ADLSDLKSTV ESYIQPGNTG LNFDDFSSLH KTLDDSFFGG
101: ACGGGENEDD PSSAAENESD LAEAFKVFDE NGDGFISARE LQTVLKKLGL PEGGEMERVE KMIVSVDRNQ DGRVDFFEFK NMMRTVVIPS S

Arabidopsis Description

CML42Calcium-binding protein CML42 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.