Factsheet for Os02t0122600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0331700-02
Os05t0312600-01
Os07t0681400-01
Os08t0144100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46600.1	Os03t0331700-02	AT4G20780.1	19720824
AT2G46600.1	Os05t0312600-01	AT4G20780.1	19720824
AT2G46600.1	Os07t0681400-01	AT4G20780.1	19720824
AT2G46600.1	Os08t0144100-01	AT4G20780.1	19720824

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G088900.1	Wheat	cytosol	68.03	80.0
TraesCS6A01G065900.1	Wheat	cytosol	68.03	80.0
TraesCSU01G118100.1	Wheat	cytosol	66.67	77.78
HORVU6Hr1G011970.2	Barley	cytosol	68.03	73.53
GSMUA_Achr1P03980_001	Banana	cytosol	53.74	63.71
Bra004524.1-P	Field mustard	cytosol	41.5	55.96
CDX80031	Canola	cytosol	41.5	55.96
Os06t0683400-02	Rice	cytosol	46.94	55.2
VIT_15s0046g00070.t01	Wine grape	cytosol	47.62	55.12
Bra000430.1-P	Field mustard	cytosol	43.54	54.24
KRG97213	Soybean	cytosol	46.26	53.97
KRH68937	Soybean	cytosol	46.26	53.97
KRH06431	Soybean	cytosol	44.9	52.8
KRH47865	Soybean	cytosol	44.9	52.8
Zm00001d053926_P001	Maize	cytosol	59.86	52.69
CDY27313	Canola	cytosol	46.94	51.88
Solyc10g009340.1.1	Tomato	cytosol	42.86	51.22
CDY13397	Canola	cytosol	46.26	51.13
PGSC0003DMT400048609	Potato	cytosol	42.18	50.82
Os01t0783700-01	Rice	cytosol	38.1	50.45
CDY61726	Canola	cytosol	45.58	50.38
Bra039271.1-P	Field mustard	cytosol	45.58	50.38
AT2G46600.1	Thale cress	cytosol	44.9	48.89
CDX83356	Canola	cytosol	43.54	47.76
CDX95707	Canola	cytosol	42.86	47.01
CDY41540	Canola	cytosol	40.82	41.1

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:4328132	ProteinID:BAD07944.1	ProteinID:BAF07642.1	ProteinID:BAS76723.1
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0010091	GO:GO:0016043	GO:GO:0030154
InterPro:IPR002048	EnsemblPlantsGene:Os02g0122600	EnsemblPlants:Os02t0122600-00	PFAM:PF13833	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR44180	PANTHER:PTHR44180:SF7	UniProt:Q6Z727	SUPFAM:SSF47473	UniParc:UPI0000236844	RefSeq:XP_015626726.1
SEG:seg	:	:	:	:	:

Description

EF-Hand type domain containing protein. (Os02t0122600-00)

Coordinates

chr2:-:1187089..1187904

Molecular Weight (calculated)

15159.9 Da

IEP (calculated)

4.028

GRAVY (calculated)

-0.169

Length

147 amino acids

Sequence
(BLAST)

001: MNHHQQIRST TAAEQQEASA GGGGGEEYED LMPVMAGRLG AEGLLSELRA GFRLLADPAR GAITAESLRR SAASVLGLGG GGGEMTVEEA AAMVREGDQD
101: GDGALSEAEF CVLMVRLSPG IMGDAEGWLE EAIADELLRS LPPPPPA

Best Arabidopsis Sequence Match ( AT2G46600.1 )
(BLAST)

001: MEPTEKSMLL ETTSTTKMET KYEDMLPVMA EKMDVEEFVS ELCKGFSLLA DPERHLITAE SLRRNSGILG IEGMSKEDAQ GMVREGDLDG DGALNQTEFC
101: VLMVRLSPEM MEDAETWLEK ALTQELCNHN LSSMP

Arabidopsis Description

KICCalcium-binding protein KIC [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPX9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.