Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0642300-00 | |
| Os12t0614600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54490.1 | Os03t0642300-00 | AT2G34650.1 | 12857841 |
| AT5G54490.1 | Os12t0614600-01 | AT2G34650.1 | 12857841 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G350200.1 | Wheat | cytosol | 90.4 | 87.6 |
| TraesCS7A01G450400.1 | Wheat | cytosol | 87.2 | 87.2 |
| TraesCS7D01G439800.1 | Wheat | cytosol | 88.0 | 82.09 |
| EER88832 | Sorghum | cytosol | 84.8 | 81.54 |
| Zm00001d014491_P001 | Maize | cytosol | 84.8 | 80.3 |
| GSMUA_Achr3P23000_001 | Banana | cytosol | 60.0 | 70.75 |
| GSMUA_Achr5P26360_001 | Banana | cytosol | 59.2 | 62.71 |
| VIT_12s0134g00240.t01 | Wine grape | cytosol | 56.0 | 60.34 |
| VIT_19s0014g03970.t01 | Wine grape | cytosol | 52.0 | 60.19 |
| Os01t0783700-01 | Rice | cytosol | 52.0 | 58.56 |
| Solyc03g006710.1.1 | Tomato | cytosol | 53.6 | 58.26 |
| VIT_00s0347g00040.t01 | Wine grape | cytosol | 51.2 | 56.64 |
| PGSC0003DMT400057519 | Potato | cytosol | 52.0 | 56.52 |
| PGSC0003DMT400012996 | Potato | cytosol | 52.0 | 56.52 |
| KRH55440 | Soybean | cytosol | 45.6 | 56.44 |
| PGSC0003DMT400064403 | Potato | cytosol | 52.8 | 56.41 |
| KRH10720 | Soybean | cytosol | 51.2 | 56.14 |
| KRH21601 | Soybean | cytosol | 51.2 | 56.14 |
| KRH22182 | Soybean | cytosol | 52.0 | 56.03 |
| Solyc07g063690.1.1 | Tomato | cytosol | 50.4 | 55.75 |
| PGSC0003DMT400049542 | Potato | cytosol | 50.4 | 55.75 |
| VIT_02s0012g00640.t01 | Wine grape | cytosol | 49.6 | 55.36 |
| Solyc02g079520.1.1 | Tomato | nucleus | 50.4 | 54.78 |
| KRH27149 | Soybean | cytosol | 50.4 | 54.78 |
| HORVU7Hr1G101740.2 | Barley | cytosol, plastid | 68.0 | 52.8 |
| CDY29293 | Canola | cytosol | 53.6 | 52.76 |
| PGSC0003DMT400064404 | Potato | cytosol | 51.2 | 52.46 |
| Solyc10g006700.1.1 | Tomato | cytosol | 51.2 | 52.46 |
| KRH25447 | Soybean | cytosol | 52.8 | 52.38 |
| KRH26016 | Soybean | cytosol | 46.4 | 52.25 |
| VIT_02s0012g00650.t01 | Wine grape | cytosol | 46.4 | 52.25 |
| KRH25972 | Soybean | cytosol | 49.6 | 52.1 |
| Bra002984.1-P | Field mustard | cytosol | 54.4 | 51.91 |
| CDY42456 | Canola | cytosol | 54.4 | 51.91 |
| CDY61745 | Canola | cytosol | 54.4 | 51.91 |
| Solyc07g053050.1.1 | Tomato | cytosol | 48.0 | 51.72 |
| AT4G27280.1 | Thale cress | cytosol | 53.6 | 51.54 |
| Solyc10g006660.2.1 | Tomato | cytosol | 52.8 | 51.16 |
| VIT_02s0012g00660.t01 | Wine grape | cytosol | 48.8 | 50.83 |
| PGSC0003DMT400067274 | Potato | cytosol | 48.0 | 50.42 |
| Bra022723.1-P | Field mustard | cytosol | 52.8 | 50.38 |
| CDY28767 | Canola | cytosol | 52.0 | 49.62 |
| CDY48640 | Canola | cytosol | 52.0 | 49.62 |
| KRH55477 | Soybean | cytosol | 47.2 | 49.58 |
| Solyc02g079720.1.1 | Tomato | cytosol | 42.4 | 49.53 |
| KRH22173 | Soybean | cytosol | 48.8 | 49.19 |
| KRH26856 | Soybean | cytosol | 48.0 | 49.18 |
| PGSC0003DMT400064349 | Potato | cytosol | 46.4 | 49.15 |
| KRH22491 | Soybean | cytosol | 47.2 | 48.36 |
| AT5G54490.1 | Thale cress | cytosol | 48.8 | 48.03 |
| Os02t0122600-00 | Rice | cytosol | 55.2 | 46.94 |
| KRH27151 | Soybean | cytosol | 45.6 | 46.72 |
| PGSC0003DMT400036057 | Potato | cytosol | 41.6 | 45.22 |
| VIT_19s0014g04650.t01 | Wine grape | cytosol | 52.8 | 44.0 |
| Solyc10g006740.2.1 | Tomato | extracellular | 44.0 | 37.67 |
| CDX89262 | Canola | cytosol, peroxisome, plastid | 53.6 | 24.63 |
| Bra026364.1-P | Field mustard | cytosol | 52.8 | 22.6 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4341871 | EMBL:AK111852 | EMBL:AK111897 | EMBL:AK112082 |
| ProteinID:BAD45550.1 | ProteinID:BAF20303.1 | ProteinID:BAS99174.1 | ProteinID:EAZ38054.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | EnsemblPlantsGene:Os06g0683400 |
| EnsemblPlants:Os06t0683400-02 | PFAM:PF13833 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR44180 | PANTHER:PTHR44180:SF5 |
| UniProt:Q655G7 | SUPFAM:SSF47473 | UniParc:UPI000043A318 | RefSeq:XP_015643679.1 | SEG:seg | : |
Description
OsCCD1Small calcium-binding protein with one EF-hand motif, Positive regulation of osmotic and salt tolerance (Os06t0683400-02)
Coordinates
chr6:+:28483812..28484488
Molecular Weight (calculated)
13993.8 Da
IEP (calculated)
3.870
GRAVY (calculated)
-0.222
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEQRQQQQ MMQEGFEDYL PVMAERLGEE GLMQELASGF RLLMDPASGL ITFDSLRRNA PLLGLGGMSD DDLRGMLAEG DFDGDGALSE MEFCVLMVRL
101: SPDLMDEPRR WLDDAVAQAS QFLFH
101: SPDLMDEPRR WLDDAVAQAS QFLFH
001: MASPKSPTRP TQQNPQPNFH DFLPTMAGNL GGEGLIGELC NGFELLMDRE KGVITFESLR RNAAAVLGLG DLTDEDVRCM IKEGDFDCDG ALNQMEFCVL
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
101: MFRLSPDLME ASRCLVTEVI EEEFGFTRRH
Arabidopsis Description
KRP1Calcium-binding protein KRP1 [Source:UniProtKB/Swiss-Prot;Acc:O81831]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.