Factsheet for Bra022723.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005403.1-P
Bra018084.1-P
Bra019524.1-P
Bra021925.1-P
Bra033773.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54490.1	Bra005403.1-P	AT2G34650.1	12857841
AT5G54490.1	Bra021925.1-P	AT2G34650.1	12857841
AT5G54490.1	Bra018084.1-P	AT3G48100.1	18642946
AT5G54490.1	Bra019524.1-P	AT3G48100.1	18642946
AT5G54490.1	Bra033773.1-P	AT3G48100.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28767	Canola	cytosol	98.47	98.47
Bra002984.1-P	Field mustard	cytosol	90.08	90.08
AT5G54490.1	Thale cress	cytosol	83.21	85.83
PGSC0003DMT400064403	Potato	cytosol	60.31	67.52
PGSC0003DMT400064404	Potato	cytosol	60.31	64.75
Solyc10g006700.1.1	Tomato	cytosol	59.54	63.93
KRH22182	Soybean	cytosol	54.96	62.07
KRH27149	Soybean	cytosol	54.2	61.74
Solyc10g006660.2.1	Tomato	cytosol	60.31	61.24
KRH25972	Soybean	cytosol	54.96	60.5
GSMUA_Achr3P23000_001	Banana	cytosol	48.09	59.43
TraesCS3A01G315400.1	Wheat	cytosol	49.62	58.56
Os01t0783700-01	Rice	cytosol	49.62	58.56
KRH55477	Soybean	cytosol	52.67	57.98
TraesCS3B01G351500.1	Wheat	cytosol	48.85	57.66
GSMUA_Achr7P27110_001	Banana	cytosol	50.38	56.9
KXG33526	Sorghum	cytosol	44.27	56.86
GSMUA_Achr9P30020_001	Banana	cytosol	48.85	56.64
Zm00001d031419_P001	Maize	cytosol	47.33	56.36
Zm00001d043258_P001	Maize	cytosol	39.69	55.91
TraesCS3D01G316100.1	Wheat	cytosol	47.33	55.86
KXG25648	Sorghum	cytosol	45.8	54.55
GSMUA_Achr8P01460_001	Banana	cytosol	46.56	54.46
Os06t0683400-02	Rice	cytosol	50.38	52.8
TraesCS7A01G450400.1	Wheat	cytosol	50.38	52.8
GSMUA_Achr5P26360_001	Banana	cytosol	47.33	52.54
TraesCS7B01G350200.1	Wheat	cytosol	50.38	51.16
VIT_19s0014g04650.t01	Wine grape	cytosol	57.25	50.0
TraesCS7D01G439800.1	Wheat	cytosol	50.38	49.25
Bra000430.1-P	Field mustard	cytosol	44.27	49.15
EER88832	Sorghum	cytosol	47.33	47.69
HORVU3Hr1G077070.1	Barley	cytosol	47.33	46.97
Bra004524.1-P	Field mustard	cytosol	38.93	46.79
Zm00001d014491_P001	Maize	cytosol	46.56	46.21
Bra039271.1-P	Field mustard	cytosol	43.51	42.86
Bra026364.1-P	Field mustard	cytosol	80.92	36.3
HORVU7Hr1G101740.2	Barley	cytosol, plastid	38.93	31.68

Protein Annotations

EnsemblPlants:Bra022723.1	EnsemblPlants:Bra022723.1-P	EnsemblPlantsGene:Bra022723	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44180
PANTHER:PTHR44180:SF1	PFAM:PF13833	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SUPFAM:SSF47473
UniParc:UPI000254685C	UniProt:M4E1S3	MapMan:35.1	:	:	:

Description

AT5G54490 (E=4e-053) PBP1 | PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding / protein binding

Coordinates

chrA02:-:7789185..7789580

Molecular Weight (calculated)

14772.5 Da

IEP (calculated)

4.276

GRAVY (calculated)

-0.398

Length

131 amino acids

Sequence
(BLAST)

001: MASPKSSTRP TQQNQDPTFH DFFPAMAGKL GGEGLIDELC KGFELLMDRD RGVITFESLR RNASAVLGLG DLTDDDVRCM IDEGDFDRDG ALNQMEFCVL
101: MFRLSPDLME ASRCVVTEAI EEEFCDRTHR R

Best Arabidopsis Sequence Match ( AT5G54490.1 )
(BLAST)

001: MASPKSSTRP NQENQEPQFQ DFFPTMAGKL GGEGLIEEIC KGFELLMDKD KGVITFESLR RNASTVLGLG DLTDDDVRYM INEGDFDRDG ALNQMEFCVL
101: MFRLSPELME ASRCVVTEVI EEEFYRH

Arabidopsis Description

PBP1PBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178URF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.