Factsheet for Bra033773.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002252.1-P
Bra002984.1-P
Bra009364.1-P
Bra009922.1-P
Bra010342.1-P
Bra011079.1-P
Bra011551.1-P
Bra017545.1-P
Bra017566.1-P
Bra017669.1-P
Bra018311.1-P
Bra018315.1-P
Bra019804.1-P
Bra020055.1-P
Bra021636.1-P
Bra021637.1-P
Bra022723.1-P
Bra022798.1-P
Bra022802.1-P
Bra022803.1-P
Bra023876.1-P
Bra024165.1-P
Bra025027.1-P
Bra025394.1-P
Bra026238.1-P
Bra026939.1-P
Bra029260.1-P
Bra030205.1-P
Bra034643.1-P
Bra036215.1-P
Bra036596.1-P
Bra038353.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48100.1	Bra019804.1-P	AT1G13030.1	18642946
AT3G48100.1	Bra026939.1-P	AT1G13030.1	18642946
AT3G48100.1	Bra038353.1-P	AT1G68790.1	18642946
AT3G48100.1	Bra018315.1-P	AT2G30410.1	18642946
AT3G48100.1	Bra022798.1-P	AT2G30410.1	18642946
AT3G48100.1	Bra018311.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra021636.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra021637.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra022802.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra022803.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra023876.1-P	AT3G21510.1	16965536
AT3G48100.1	Bra025394.1-P	AT3G29350.1	16965536
AT3G48100.1	Bra036215.1-P	AT3G29350.1	16965536
AT3G48100.1	Bra025394.1-P	AT3G29350.1	18642946
AT3G48100.1	Bra036215.1-P	AT3G29350.1	18642946
AT3G48100.1	Bra026238.1-P	AT4G17240.1	18642946
AT3G48100.1	Bra030205.1-P	AT4G17240.1	18642946
AT3G48100.1	Bra010342.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra011079.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra024165.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra011551.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra017669.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra034643.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra009364.1-P	AT5G08720.1	18642946
AT3G48100.1	Bra002252.1-P	AT5G19650.1	18642946
AT3G48100.1	Bra020055.1-P	AT5G19650.1	18642946
AT3G48100.1	Bra009922.1-P	AT5G26830.1	18642946
AT3G48100.1	Bra036596.1-P	AT5G26830.1	18642946
AT3G48100.1	Bra017566.1-P	AT5G46250.1	18642946
AT3G48100.1	Bra025027.1-P	AT5G46250.1	18642946
AT3G48100.1	Bra017545.1-P	AT5G46430.1	18642946
AT3G48100.1	Bra002984.1-P	AT5G54490.1	18642946
AT3G48100.1	Bra022723.1-P	AT5G54490.1	18642946
AT3G48100.1	Bra029260.1-P	AT5G62440.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54257	Canola	cytosol, nucleus, peroxisome	100.0	98.36
AT3G48100.1	Thale cress	cytosol	97.22	95.11
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	92.78	93.3
Bra019524.1-P	Field mustard	cytosol	66.67	89.55
Bra010132.1-P	Field mustard	nucleus	75.0	71.05
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	62.78	61.08
KRH03376	Soybean	nucleus	65.56	57.0
KRH57009	Soybean	nucleus	66.67	56.87
Bra003782.1-P	Field mustard	cytosol	62.22	56.85
Solyc03g113720.2.1	Tomato	nucleus	60.56	55.9
Bra016526.1-P	Field mustard	cytosol	62.78	54.59
PGSC0003DMT400063187	Potato	cytosol	60.56	54.5
Bra025708.1-P	Field mustard	nucleus	64.44	54.46
KRH63457	Soybean	cytosol	61.11	53.92
KRH54462	Soybean	cytosol	59.44	52.45
Bra014695.1-P	Field mustard	cytosol	35.0	49.61
Bra000199.1-P	Field mustard	cytosol	43.89	49.07
Bra027829.1-P	Field mustard	nucleus	58.89	46.9
VIT_17s0000g07580.t01	Wine grape	cytosol, nucleus, plastid	66.11	46.12
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	41.11	43.79
Bra004615.1-P	Field mustard	nucleus	50.56	42.52
Bra018439.1-P	Field mustard	nucleus	58.89	42.23
Bra000224.1-P	Field mustard	nucleus	50.0	41.67
Bra016943.1-P	Field mustard	cytosol	50.0	40.54
Bra019932.1-P	Field mustard	nucleus	56.67	40.32
Bra031714.1-P	Field mustard	nucleus	58.33	40.23
Bra036963.1-P	Field mustard	nucleus	58.33	40.23
Bra007295.1-P	Field mustard	cytosol	48.33	36.86
Bra003265.1-P	Field mustard	cytosol	48.89	36.67
Bra014649.1-P	Field mustard	nucleus	46.11	35.47

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra033773	EnsemblPlants:Bra033773.1	EnsemblPlants:Bra033773.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4EY82	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF17	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002543D6C

Description

AT3G48100 (E=6e-091) ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator

Coordinates

chrA01:-:14363702..14365251

Molecular Weight (calculated)

20405.9 Da

IEP (calculated)

5.404

GRAVY (calculated)

-0.134

Length

180 amino acids

Sequence
(BLAST)

001: MAEVLRPEML DISNDTSSLA SPELLHVLAV DDSIVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGDN SSVGFQINLI MTDYSMPGMT GYELLKKIKE
101: SSAFREIPVV IMSSENILPR IDRCLEEGAE DFLLKPVKLA DVKRLRDSLM KAEERVFKNI MHKRELEAND IYSQLKRAKI

Best Arabidopsis Sequence Match ( AT3G48100.1 )
(BLAST)

001: MAEVLRPEML DISNDTSSLA SPKLLHVLAV DDSMVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGEN NSSVGFEDLK INLIMTDYSM PGMTGYELLK
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI

Arabidopsis Description

ARR5Response reactor 2 [Source:UniProtKB/TrEMBL;Acc:Q0WW39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.