Factsheet for Bra000224.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra023876.1-P
Bra025394.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41310.1	Bra023876.1-P	AT3G21510.1	16965536
AT2G41310.1	Bra023876.1-P	AT3G21510.1	18642946
AT2G41310.1	Bra025394.1-P	AT3G29350.1	16965536
AT2G41310.1	Bra036215.1-P	AT3G29350.1	16965536

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35419	Canola	nucleus	100.0	100.0
Bra016943.1-P	Field mustard	cytosol	88.43	86.04
Bra004615.1-P	Field mustard	nucleus	85.19	85.98
AT2G41310.1	Thale cress	nucleus	89.35	85.78
Bra014649.1-P	Field mustard	nucleus	73.61	67.95
Bra003265.1-P	Field mustard	cytosol	72.22	65.0
Bra007295.1-P	Field mustard	cytosol	69.91	63.98
GSMUA_Achr3P08680_001	Banana	cytosol	52.31	59.79
PGSC0003DMT400076758	Potato	nucleus	62.5	59.73
GSMUA_Achr11P...	Banana	nucleus	50.0	58.38
GSMUA_Achr5P08230_001	Banana	nucleus	51.85	58.03
PGSC0003DMT400076726	Potato	nucleus	60.65	57.96
VIT_08s0007g05390.t01	Wine grape	nucleus	58.33	57.8
Solyc10g079600.1.1	Tomato	nucleus	60.65	57.71
GSMUA_AchrUn_...	Banana	nucleus	53.24	57.5
PGSC0003DMT400007618	Potato	nucleus	56.94	57.48
GSMUA_Achr11P...	Banana	nucleus	47.69	56.91
TraesCS4B01G178900.1	Wheat	cytosol	37.04	56.74
Os12t0139400-01	Rice	nucleus	51.85	55.72
KRG95133	Soybean	nucleus	62.04	54.47
KRH66808	Soybean	nucleus	62.5	54.44
Solyc10g079700.1.1	Tomato	nucleus	59.72	53.97
Os11t0143300-02	Rice	cytosol	51.85	53.85
KXG27703	Sorghum	nucleus	49.07	52.48
Os01t0952500-01	Rice	cytosol	55.09	51.29
Bra014695.1-P	Field mustard	cytosol	30.09	51.18
EES02064	Sorghum	cytosol	56.94	50.2
Bra033773.1-P	Field mustard	nucleus	41.67	50.0
Zm00001d011849_P002	Maize	cytosol	53.7	49.79
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	41.2	49.72
TraesCS5D01G140200.1	Wheat	nucleus	52.31	48.92
TraesCS5B01G132900.2	Wheat	cytosol	51.85	48.28
TraesCS3B01G548600.1	Wheat	cytosol	53.24	47.92
TraesCS5A01G131600.2	Wheat	nucleus	51.39	46.64
Bra000199.1-P	Field mustard	cytosol	34.72	46.58
Zm00001d023242_P001	Maize	nucleus	29.63	46.04
HORVU3Hr1G108540.2	Barley	nucleus	52.31	45.56
Bra010132.1-P	Field mustard	nucleus	39.81	45.26
HORVU5Hr1G043090.1	Barley	nucleus	50.93	45.08
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	34.72	44.38
Bra016526.1-P	Field mustard	cytosol	42.13	43.96
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	37.5	43.78
Bra025708.1-P	Field mustard	nucleus	41.2	41.78
TraesCS3D01G494600.1	Wheat	nucleus	51.85	41.64
Bra003782.1-P	Field mustard	cytosol	37.5	41.12
Bra019524.1-P	Field mustard	cytosol	25.0	40.3
Bra027829.1-P	Field mustard	nucleus	42.13	40.27
Zm00001d052476_P001	Maize	nucleus	22.69	40.16
KXG22820	Sorghum	endoplasmic reticulum	48.61	37.63
Bra018439.1-P	Field mustard	nucleus	43.06	37.05
Bra031714.1-P	Field mustard	nucleus	43.52	36.02
Bra036963.1-P	Field mustard	nucleus	43.52	36.02
Bra019932.1-P	Field mustard	nucleus	42.13	35.97
GSMUA_Achr8P09640_001	Banana	cytosol	25.46	31.25

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra000224	EnsemblPlants:Bra000224.1	EnsemblPlants:Bra000224.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4C7P6	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF26	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002540347
SEG:seg	:	:	:	:	:

Description

AT2G41310 (E=2e-087) ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator

Coordinates

chrA03:+:10000127..10001362

Molecular Weight (calculated)

24276.1 Da

IEP (calculated)

4.645

GRAVY (calculated)

-0.482

Length

216 amino acids

Sequence
(BLAST)

001: MGVVTESQFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALELLGL RESNESDDPN ATSTSPEVEI NLIITDYCMP GMTGYDLLKR VKESAAFRSI
101: PVVIMSSENV PARISRCLEE GAEEFFLKPV KLADLTKLKP HMMKTKLKKE SEKPAEEVKP EIEEEESPVI EILTLHQELE SEQQEPMLSN NKRKAMEEAI
201: STGRSRPKYN DITTSV

Best Arabidopsis Sequence Match ( AT2G41310.1 )
(BLAST)

001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV

Arabidopsis Description

ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.