Factsheet for Bra003265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009364.1-P
Bra023876.1-P
Bra025394.1-P
Bra026012.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57040.1	Bra026012.1-P	AT1G16970.1	18642946
AT3G57040.1	Bra023876.1-P	AT3G21510.1	10930573
AT3G57040.1	Bra023876.1-P	AT3G21510.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra036215.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra025394.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra036215.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra036215.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra025394.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra036215.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra009364.1-P	AT5G08720.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67674	Canola	cytosol	93.75	96.15
Bra014649.1-P	Field mustard	nucleus	82.08	84.19
Bra007295.1-P	Field mustard	cytosol	82.08	83.47
AT3G57040.1	Thale cress	nucleus	79.17	81.2
Bra000224.1-P	Field mustard	nucleus	65.0	72.22
Bra016943.1-P	Field mustard	cytosol	66.67	72.07
Bra004615.1-P	Field mustard	nucleus	62.5	70.09
PGSC0003DMT400076758	Potato	nucleus	59.58	63.27
VIT_08s0007g05390.t01	Wine grape	nucleus	56.25	61.93
PGSC0003DMT400076726	Potato	nucleus	57.92	61.5
Solyc10g079600.1.1	Tomato	nucleus	57.5	60.79
PGSC0003DMT400007618	Potato	nucleus	53.75	60.28
GSMUA_Achr11P...	Banana	nucleus	46.25	60.0
GSMUA_Achr3P08680_001	Banana	cytosol	47.08	59.79
Solyc10g079700.1.1	Tomato	nucleus	58.75	59.0
KRH66808	Soybean	nucleus	60.0	58.06
GSMUA_Achr5P08230_001	Banana	nucleus	46.67	58.03
GSMUA_Achr11P...	Banana	nucleus	43.33	57.46
KRG95133	Soybean	nucleus	58.75	57.32
GSMUA_AchrUn_...	Banana	nucleus	47.5	57.0
TraesCS4B01G178900.1	Wheat	cytosol	33.33	56.74
Os12t0139400-01	Rice	nucleus	46.67	55.72
Os11t0143300-02	Rice	cytosol	46.67	53.85
KXG27703	Sorghum	nucleus	43.75	51.98
Bra014695.1-P	Field mustard	cytosol	27.5	51.97
Zm00001d011849_P002	Maize	cytosol	49.17	50.64
Os01t0952500-01	Rice	cytosol	48.33	50.0
TraesCS5B01G132900.2	Wheat	cytosol	47.5	49.14
TraesCS5D01G140200.1	Wheat	nucleus	47.08	48.92
Bra033773.1-P	Field mustard	nucleus	36.67	48.89
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	36.25	48.6
EES02064	Sorghum	cytosol	48.33	47.35
Bra000199.1-P	Field mustard	cytosol	31.67	47.2
TraesCS5A01G131600.2	Wheat	nucleus	46.25	46.64
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	35.0	45.41
Zm00001d023242_P001	Maize	nucleus	26.25	45.32
TraesCS3B01G548600.1	Wheat	cytosol	45.0	45.0
HORVU5Hr1G043090.1	Barley	nucleus	45.42	44.67
Bra010132.1-P	Field mustard	nucleus	35.0	44.21
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	30.83	43.79
Bra016526.1-P	Field mustard	cytosol	37.5	43.48
HORVU3Hr1G108540.2	Barley	nucleus	43.75	42.34
Bra025708.1-P	Field mustard	nucleus	37.5	42.25
Zm00001d052476_P001	Maize	nucleus	21.25	41.8
Bra027829.1-P	Field mustard	nucleus	38.75	41.15
Bra003782.1-P	Field mustard	cytosol	33.75	41.12
TraesCS3D01G494600.1	Wheat	nucleus	45.0	40.15
Bra019524.1-P	Field mustard	cytosol	21.67	38.81
KXG22820	Sorghum	endoplasmic reticulum	43.75	37.63
Bra018439.1-P	Field mustard	nucleus	38.75	37.05
GSMUA_Achr8P09640_001	Banana	cytosol	27.08	36.93
Bra019932.1-P	Field mustard	nucleus	38.33	36.36
Bra031714.1-P	Field mustard	nucleus	38.75	35.63
Bra036963.1-P	Field mustard	nucleus	38.75	35.63

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra003265	EnsemblPlants:Bra003265.1	EnsemblPlants:Bra003265.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4CGD2	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF26	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002541543
SEG:seg	:	:	:	:	:

Description

AT3G57040 (E=3e-085) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator

Coordinates

chrA07:+:12264475..12265694

Molecular Weight (calculated)

26849.5 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.278

Length

240 amino acids

Sequence
(BLAST)

001: MVMAAEPQFH VLAVDDSLFD RKFIERLLQK ASCQVTTVDS GYKALEFLGL REGFEINDPD AVSTSPVIHQ EVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: CKNIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPLMMKTK LKNQKLEEIE APSKDESGTV AAVVEPEVKD LTEIGIKILP LQSEVEPKQV
201: HLQVVQQEEQ TMSNNKRKSV EEGLSTDRSR PRFEGITTAV

Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)

001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV

Arabidopsis Description

ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.