Factsheet for Bra023876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000224.1-P
Bra003068.1-P
Bra003265.1-P
Bra003936.1-P
Bra004160.1-P
Bra007295.1-P
Bra007963.1-P
Bra014649.1-P
Bra016526.1-P
Bra016943.1-P
Bra018084.1-P
Bra018439.1-P
Bra019524.1-P
Bra019932.1-P
Bra022643.1-P
Bra025708.1-P
Bra029079.1-P
Bra030037.1-P
Bra031714.1-P
Bra033773.1-P
Bra035381.1-P
Bra036963.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21510.1	Bra018439.1-P	AT1G10470.1	10930573
AT3G21510.1	Bra019932.1-P	AT1G10470.1	10930573
AT3G21510.1	Bra031714.1-P	AT1G10470.1	10930573
AT3G21510.1	Bra036963.1-P	AT1G10470.1	10930573
AT3G21510.1	Bra018439.1-P	AT1G10470.1	16965536
AT3G21510.1	Bra019932.1-P	AT1G10470.1	16965536
AT3G21510.1	Bra031714.1-P	AT1G10470.1	16965536
AT3G21510.1	Bra036963.1-P	AT1G10470.1	16965536
AT3G21510.1	Bra016526.1-P	AT1G19050.1	16965536
AT3G21510.1	Bra025708.1-P	AT1G19050.1	16965536
AT3G21510.1	Bra016526.1-P	AT1G19050.1	18642946
AT3G21510.1	Bra025708.1-P	AT1G19050.1	18642946
AT3G21510.1	Bra030037.1-P	AT1G27320.1	16965536
AT3G21510.1	Bra004160.1-P	AT1G66340.1	10930573
AT3G21510.1	Bra004160.1-P	AT1G66340.1	18384742
AT3G21510.1	Bra003936.1-P	AT1G71130.1	21705390
AT3G21510.1	Bra007963.1-P	AT1G71130.1	21705390
AT3G21510.1	Bra000224.1-P	AT2G41310.1	16965536
AT3G21510.1	Bra016943.1-P	AT2G41310.1	16965536
AT3G21510.1	Bra000224.1-P	AT2G41310.1	18642946
AT3G21510.1	Bra016943.1-P	AT2G41310.1	18642946
AT3G21510.1	Bra018084.1-P	AT3G48100.1	16965536
AT3G21510.1	Bra019524.1-P	AT3G48100.1	16965536
AT3G21510.1	Bra033773.1-P	AT3G48100.1	16965536
AT3G21510.1	Bra003265.1-P	AT3G57040.1	10930573
AT3G21510.1	Bra007295.1-P	AT3G57040.1	10930573
AT3G21510.1	Bra014649.1-P	AT3G57040.1	10930573
AT3G21510.1	Bra003265.1-P	AT3G57040.1	16965536
AT3G21510.1	Bra007295.1-P	AT3G57040.1	16965536
AT3G21510.1	Bra014649.1-P	AT3G57040.1	16965536
AT3G21510.1	Bra035381.1-P	AT5G35750.1	16965536
AT3G21510.1	Bra003068.1-P	AT5G53290.1	21705390
AT3G21510.1	Bra022643.1-P	AT5G53290.1	21705390
AT3G21510.1	Bra029079.1-P	AT5G53290.1	21705390

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37282	Canola	cytosol, nucleus, plastid	100.0	100.0
AT3G21510.1	Thale cress	cytosol, nucleus, plastid	94.81	94.81
KRH11296	Soybean	cytosol	73.38	72.9
KRH20965	Soybean	cytosol	72.73	72.26
VIT_05s0020g02210.t01	Wine grape	cytosol	68.83	69.74
KRH50948	Soybean	cytosol	70.13	69.68
PGSC0003DMT400081747	Potato	cytosol, nucleus, plastid	67.53	68.87
Solyc01g080540.2.1	Tomato	cytosol, nucleus, plastid	66.88	68.21
GSMUA_Achr11P...	Banana	cytosol	64.29	65.56
GSMUA_Achr7P14570_001	Banana	cytosol	54.55	55.26
GSMUA_Achr7P14620_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.6	53.29
GSMUA_AchrUn_...	Banana	cytosol	52.6	53.29
Bra033398.1-P	Field mustard	cytosol	53.25	52.56
Bra027169.1-P	Field mustard	cytosol, nucleus, plastid	38.31	47.58
Bra036215.1-P	Field mustard	cytosol	47.4	46.79
Bra025394.1-P	Field mustard	cytosol	47.4	46.79
Bra003551.1-P	Field mustard	cytosol	46.75	46.75
Bra028236.1-P	Field mustard	cytosol	48.05	41.57
Bra001629.1-P	Field mustard	cytosol	32.47	36.76

Protein Annotations

Gene3D:1.20.120.160	MapMan:11.4.2.2	EnsemblPlantsGene:Bra023876	EnsemblPlants:Bra023876.1	EnsemblPlants:Bra023876.1-P	GO:GO:0000160
GO:GO:0003674	GO:GO:0003824	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009736
GO:GO:0009927	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0043424	InterPro:HPT_dom_sf	InterPro:IPR008207	InterPro:IPR036641	UniProt:M4E522	PFAM:PF01627
PFscan:PS50894	PANTHER:PTHR28242	PANTHER:PTHR28242:SF5	SUPFAM:SSF47226	InterPro:Sig_transdc_His_kin_Hpt_dom	UniParc:UPI0002544540
SEG:seg	:	:	:	:	:

Description

AT3G21510 (E=2e-074) AHP1 | AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase

Coordinates

chrA01:+:20708169..20709312

Molecular Weight (calculated)

17650.2 Da

IEP (calculated)

5.197

GRAVY (calculated)

-0.251

Length

154 amino acids

Sequence
(BLAST)

001: MELVQMQKSL QDYTKSLFLD GVLDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RNFCEQQNVE GCHRCLQQVK KEYYLVKNRL ETLFKLEQQI VASGGMIPAM ELGF

Best Arabidopsis Sequence Match ( AT3G21510.1 )
(BLAST)

001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF

Arabidopsis Description

AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.