Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g02210.t01 | Wine grape | cytosol | 72.85 | 72.37 |
| VIT_14s0030g00410.t01 | Wine grape | cytosol | 69.54 | 70.0 |
| KRH33995 | Soybean | cytosol | 67.55 | 69.86 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 70.2 | 69.74 |
| PGSC0003DMT400051833 | Potato | cytosol | 69.54 | 69.08 |
| Solyc01g080540.2.1 | Tomato | cytosol, nucleus, plastid | 68.87 | 68.87 |
| KRH20965 | Soybean | cytosol | 70.2 | 68.39 |
| KRH11296 | Soybean | cytosol | 70.2 | 68.39 |
| PGSC0003DMT400081747 | Potato | cytosol, nucleus, plastid | 68.21 | 68.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.21 | 67.76 |
| Solyc01g098400.2.1 | Tomato | cytosol, nucleus, plastid | 66.23 | 67.57 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 67.55 | 67.55 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 66.89 | 66.45 |
| PGSC0003DMT400073603 | Potato | cytosol | 64.9 | 66.22 |
| KRH68619 | Soybean | cytosol, nucleus, plastid | 64.9 | 65.33 |
| KRH50948 | Soybean | cytosol | 66.89 | 65.16 |
| Bra023876.1-P | Field mustard | cytosol, nucleus, plastid | 65.56 | 64.29 |
| CDY19286 | Canola | cytosol | 65.56 | 64.29 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 65.56 | 64.29 |
| AT3G21510.1 | Thale cress | cytosol, nucleus, plastid | 64.9 | 63.64 |
| KRG96886 | Soybean | cytosol, nucleus, plastid | 62.91 | 62.5 |
| Solyc06g084410.2.1 | Tomato | cytosol | 49.01 | 61.67 |
| KRG95451 | Soybean | cytosol | 51.66 | 59.54 |
| KRH67127 | Soybean | cytosol | 33.77 | 57.95 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 57.62 | 57.24 |
| KRH31957 | Soybean | cytosol | 57.62 | 57.24 |
| KRG92807 | Soybean | cytosol | 66.23 | 54.64 |
| Bra033398.1-P | Field mustard | cytosol | 56.29 | 54.49 |
| CDX74472 | Canola | cytosol | 54.3 | 52.9 |
| CDY37867 | Canola | cytosol | 53.64 | 52.26 |
| AT3G29350.1 | Thale cress | cytosol | 53.64 | 51.92 |
| CDX85268 | Canola | cytosol | 52.32 | 50.64 |
| Bra025394.1-P | Field mustard | cytosol | 52.32 | 50.64 |
| CDX86370 | Canola | cytosol | 52.32 | 50.64 |
| CDY00096 | Canola | cytosol | 51.66 | 50.0 |
| Bra036215.1-P | Field mustard | cytosol | 51.66 | 50.0 |
| CDY19992 | Canola | cytosol | 51.66 | 50.0 |
| CDX89890 | Canola | cytosol | 55.63 | 49.41 |
| GSMUA_Achr11P... | Banana | extracellular | 48.34 | 48.99 |
| GSMUA_Achr10P... | Banana | extracellular | 47.68 | 48.32 |
| AT1G03430.2 | Thale cress | cytosol | 49.67 | 47.77 |
| GSMUA_Achr8P07680_001 | Banana | extracellular | 44.37 | 44.97 |
| CDY71948 | Canola | cytosol | 8.61 | 44.83 |
| GSMUA_Achr11P... | Banana | nucleus | 45.03 | 44.74 |
| Bra028236.1-P | Field mustard | cytosol | 52.32 | 44.38 |
| GSMUA_Achr10P... | Banana | nucleus | 43.71 | 43.71 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 56.29 | 41.67 |
| GSMUA_Achr9P16250_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.74 | 40.82 |
| AT4G04402.1 | Thale cress | extracellular | 38.41 | 34.73 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr11G25200_001 | EnsemblPlants:GSMUA_Achr11P25200_001 | EnsemblPlants:GSMUA_Achr11T25200_001 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| UniProt:M0RVA0 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF24 | SMART:SM00073 |
| SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0002957DEC | : | : | : |
Description
Histidine-containing phosphotransfer protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25200_001]
Coordinates
chr11:-:24413280..24414583
Molecular Weight (calculated)
17514.9 Da
IEP (calculated)
5.028
GRAVY (calculated)
-0.339
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MELGSLQRRY IDFTSALFRE GFLDNQYTQL QQLQDESNPE FVLEVVTLFF EDSEKLLDEL SRTLDQQVVD YKKVDAHVHQ LKGSSASIGA QRVKNVCMAF
101: RNCCEERNQE GCLRCLQQVR QEYFLVKSKL ETLFRLEKQI LAAGGSVPVL W
101: RNCCEERNQE GCLRCLQQVR QEYFLVKSKL ETLFRLEKQI LAAGGSVPVL W
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Arabidopsis Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.