Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74472 | Canola | cytosol | 78.09 | 89.68 |
| CDY37867 | Canola | cytosol | 76.97 | 88.39 |
| Bra025394.1-P | Field mustard | cytosol | 64.61 | 73.72 |
| Bra036215.1-P | Field mustard | cytosol | 63.48 | 72.44 |
| Bra033398.1-P | Field mustard | cytosol | 60.11 | 68.59 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 75.84 | 66.18 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 51.69 | 60.93 |
| PGSC0003DMT400051833 | Potato | cytosol | 50.0 | 58.55 |
| KRG95451 | Soybean | cytosol | 41.57 | 56.49 |
| Solyc06g084410.2.1 | Tomato | cytosol | 36.52 | 54.17 |
| GSMUA_Achr11P... | Banana | cytosol | 44.38 | 52.32 |
| KRH67127 | Soybean | cytosol | 25.28 | 51.14 |
| KRH31957 | Soybean | cytosol | 42.7 | 50.0 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 42.7 | 50.0 |
| Bra023876.1-P | Field mustard | cytosol, nucleus, plastid | 41.57 | 48.05 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 38.2 | 44.74 |
| Bra027169.1-P | Field mustard | cytosol, nucleus, plastid | 30.9 | 44.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.08 | 43.42 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.52 | 42.76 |
| Bra003551.1-P | Field mustard | cytosol | 33.15 | 38.31 |
| Bra001629.1-P | Field mustard | cytosol | 26.97 | 35.29 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | EnsemblPlantsGene:Bra028236 | EnsemblPlants:Bra028236.1 | EnsemblPlants:Bra028236.1-P | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| UniProt:M4EHH1 | PFAM:PF01627 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF13 | SUPFAM:SSF47226 |
| InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI0002544962 | : | : | : | : |
Description
AT5G39340 (E=2e-069) AHP3, ATHP2 | AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3); histidine phosphotransfer kinase
Coordinates
chrA04:+:6948631..6950326
Molecular Weight (calculated)
19986.6 Da
IEP (calculated)
4.398
GRAVY (calculated)
-0.247
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTYHSLDLG PKNQTDVLEC CRQSNDALDE DKYFVFLTFY RESSSGFLDD QFTELKKLQD ECSPDFVAEV VSLFFEDCEK LIGNMARALD QTGNVDFSLV
101: GSSVHQLKGS SSSVGAKRVK GLCVTFKECC DSQNFEGCVR CLQQVDIEYK SLKAKLQDLF SLEQQIVQAG GRIPQVDI
101: GSSVHQLKGS SSSVGAKRVK GLCVTFKECC DSQNFEGCVR CLQQVDIEYK SLKAKLQDLF SLEQQIVQAG GRIPQVDI
001: MICKNLFIGI AISNKLYIFF FSLLLPSRRV ERAMDTLIAQ LQRRFCDFTI SLYHQGFLDD QFTELKKLQD ECSPDFVAEV VTLFFEDCEK LISNMARALD
101: QTGNVDFKLV GSSVHQLKGS SSSVGAKRVK GLCVTLKECC DSQNYEGCVR CLQQVDIEYK TLKAKLQDLF NLEQQIVQAG GRIPQVDI
101: QTGNVDFKLV GSSVHQLKGS SSSVGAKRVK GLCVTLKECC DSQNYEGCVR CLQQVDIEYK TLKAKLQDLF NLEQQIVQAG GRIPQVDI
Arabidopsis Description
AHP3histidine-containing phosphotransmitter 3 [Source:TAIR;Acc:AT5G39340]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.