Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95451 | Soybean | cytosol | 68.18 | 45.8 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 68.18 | 39.47 |
| Solyc06g084410.2.1 | Tomato | cytosol | 53.41 | 39.17 |
| KRH31957 | Soybean | cytosol | 67.05 | 38.82 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 62.5 | 36.42 |
| KRH33995 | Soybean | cytosol | 57.95 | 34.93 |
| KRH68619 | Soybean | cytosol, nucleus, plastid | 59.09 | 34.67 |
| GSMUA_Achr11P... | Banana | cytosol | 57.95 | 33.77 |
| KRG96886 | Soybean | cytosol, nucleus, plastid | 57.95 | 33.55 |
| PGSC0003DMT400051833 | Potato | cytosol | 56.82 | 32.89 |
| CDX74472 | Canola | cytosol | 56.82 | 32.26 |
| CDY37867 | Canola | cytosol | 54.55 | 30.97 |
| KRH50948 | Soybean | cytosol | 52.27 | 29.68 |
| KRH20965 | Soybean | cytosol | 52.27 | 29.68 |
| KRH11296 | Soybean | cytosol | 52.27 | 29.68 |
| AT3G29350.1 | Thale cress | cytosol | 52.27 | 29.49 |
| CDY00096 | Canola | cytosol | 51.14 | 28.85 |
| CDX86370 | Canola | cytosol | 51.14 | 28.85 |
| CDX85268 | Canola | cytosol | 51.14 | 28.85 |
| Bra036215.1-P | Field mustard | cytosol | 51.14 | 28.85 |
| Bra025394.1-P | Field mustard | cytosol | 51.14 | 28.85 |
| Bra033398.1-P | Field mustard | cytosol | 51.14 | 28.85 |
| AT1G03430.2 | Thale cress | cytosol | 51.14 | 28.66 |
| CDY19992 | Canola | cytosol | 50.0 | 28.21 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 47.73 | 27.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.59 | 26.97 |
| KRG92807 | Soybean | cytosol | 55.68 | 26.78 |
| CDX89890 | Canola | cytosol | 51.14 | 26.47 |
| KRH52794 | Soybean | cytosol, nucleus, plastid | 42.05 | 25.87 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.32 | 25.66 |
| Bra028236.1-P | Field mustard | cytosol | 51.14 | 25.28 |
| KRH47212 | Soybean | cytosol, nucleus, plastid | 40.91 | 25.17 |
| KRH44466 | Soybean | extracellular | 42.05 | 23.72 |
| KRH47442 | Soybean | extracellular | 42.05 | 23.72 |
| KRH09720 | Soybean | extracellular | 40.91 | 23.38 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 53.41 | 23.04 |
| KRH09934 | Soybean | nucleus | 38.64 | 22.67 |
| KRH44276 | Soybean | nucleus | 40.91 | 22.09 |
| KRH23400 | Soybean | nucleus | 37.5 | 22.0 |
| AT4G04402.1 | Thale cress | extracellular | 32.95 | 17.37 |
| KRH74260 | Soybean | cytosol | 28.41 | 16.13 |
| KRH30489 | Soybean | cytosol | 27.27 | 15.89 |
| CDY71948 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.160 | MapMan:11.4.2.2 | EMBL:ACUP02002037 | EnsemblPlantsGene:GLYMA_03G148600 | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009927 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043424 |
| InterPro:HPT_dom_sf | InterPro:IPR036641 | UniProt:K7KF47 | EnsemblPlants:KRH67127 | ProteinID:KRH67127 | ProteinID:KRH67127.1 |
| PANTHER:PTHR28242 | PANTHER:PTHR28242:SF13 | SUPFAM:SSF47226 | UniParc:UPI00023C1C48 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:36430701..36431907
Molecular Weight (calculated)
10055.9 Da
IEP (calculated)
4.552
GRAVY (calculated)
-0.350
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MDVSQLQRKH RDHQTAMLRE GFLEDQFNQL QKLQDESSPY FVMEVVTMFF GDSEKLLNSI ALVLVGAARV KDVCSNFSNI CEAQNQEG
001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNV SFKLCENLLV LLVYSFY
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNV SFKLCENLLV LLVYSFY
Arabidopsis Description
AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.