Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69443 | Soybean | nucleus | 92.62 | 94.17 |
| KRH45761 | Soybean | nucleus | 63.52 | 69.51 |
| KRG99225 | Soybean | nucleus | 63.11 | 69.37 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 61.07 | 67.42 |
| Bra027829.1-P | Field mustard | nucleus | 53.28 | 57.52 |
| KRH03376 | Soybean | nucleus | 48.36 | 57.0 |
| KRH53721 | Soybean | cytosol | 31.56 | 56.62 |
| CDY45155 | Canola | nucleus | 52.87 | 56.58 |
| CDY30913 | Canola | nucleus | 54.51 | 55.88 |
| PGSC0003DMT400058306 | Potato | nucleus | 56.56 | 55.65 |
| KRH57009 | Soybean | nucleus | 47.95 | 55.45 |
| Solyc05g006420.2.1 | Tomato | nucleus | 55.74 | 54.18 |
| KRH64213 | Soybean | cytosol | 32.38 | 54.11 |
| KRH63457 | Soybean | cytosol | 45.08 | 53.92 |
| CDY20630 | Canola | nucleus | 54.51 | 53.85 |
| Bra018439.1-P | Field mustard | nucleus | 55.33 | 53.78 |
| CDY20948 | Canola | nucleus | 55.74 | 53.75 |
| KRH54462 | Soybean | cytosol | 43.85 | 52.45 |
| CDX93424 | Canola | nucleus | 53.69 | 51.78 |
| CDY37975 | Canola | nucleus | 53.69 | 51.78 |
| Bra019932.1-P | Field mustard | nucleus | 53.28 | 51.38 |
| AT1G10470.1 | Thale cress | nucleus | 54.51 | 51.35 |
| CDY66046 | Canola | nucleus | 52.87 | 50.99 |
| Bra036963.1-P | Field mustard | nucleus | 54.1 | 50.57 |
| Bra031714.1-P | Field mustard | nucleus | 54.1 | 50.57 |
| CDY07801 | Canola | nucleus | 54.92 | 50.57 |
| CDY34890 | Canola | nucleus | 53.28 | 50.0 |
| KRH30056 | Soybean | nucleus | 37.7 | 49.2 |
| KRH13391 | Soybean | nucleus | 36.07 | 49.16 |
| KRH20737 | Soybean | nucleus | 35.66 | 48.6 |
| KRH62857 | Soybean | nucleus | 36.07 | 47.57 |
| AT1G59940.2 | Thale cress | golgi | 50.82 | 38.39 |
| KRH66808 | Soybean | nucleus | 37.3 | 36.69 |
| KRH18706 | Soybean | nucleus | 31.97 | 36.62 |
| KRG95133 | Soybean | nucleus | 36.89 | 36.59 |
| KRH53261 | Soybean | nucleus | 34.02 | 35.78 |
| KRH64643 | Soybean | nucleus | 34.43 | 35.74 |
Protein Annotations
| EntrezGene:100779833 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EMBL:ACUP02000063 | InterPro:CheY-like_superfamily | EnsemblPlantsGene:GLYMA_01G037500 |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | UniProt:K7K1M2 | EnsemblPlants:KRH74701 | ProteinID:KRH74701 |
| ProteinID:KRH74701.1 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 |
| SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00023370EB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:3986684..3988230
Molecular Weight (calculated)
26491.5 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.369
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTDGVVSFN HVSPEDSHEV HVLAVDDSLV DRKVIERLLK ISACKVTAVD SGIRALQFLG LDEQRRTSES DGFVPDLKVD LIITDYCMPE MTGYELLKKI
101: KESTMFREIP VVIMSSENIL PRIDRCLEEG AEDFIVKPVK LSDVKRLKGY LTPKEVIKVD RRSDGYVNGG CKGGDGGGGG GVEINNNKRK LEEQDTSDVS
201: TSPPSTSTLS SSPSVSSPSP SSSPTSSPSV LASPIRRLKM TSTD
101: KESTMFREIP VVIMSSENIL PRIDRCLEEG AEDFIVKPVK LSDVKRLKGY LTPKEVIKVD RRSDGYVNGG CKGGDGGGGG GVEINNNKRK LEEQDTSDVS
201: TSPPSTSTLS SSPSVSSPSP SSSPTSSPSV LASPIRRLKM TSTD
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.