Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027829.1-P | Field mustard | nucleus | 93.28 | 98.23 |
| CDY45155 | Canola | nucleus | 93.7 | 97.81 |
| CDY20630 | Canola | nucleus | 73.95 | 71.26 |
| CDY20948 | Canola | nucleus | 74.79 | 70.36 |
| CDX93424 | Canola | nucleus | 72.69 | 68.38 |
| CDY37975 | Canola | nucleus | 72.27 | 67.98 |
| CDY66046 | Canola | nucleus | 71.43 | 67.19 |
| CDY07801 | Canola | nucleus | 74.37 | 66.79 |
| CDY34890 | Canola | nucleus | 72.69 | 66.54 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 44.54 | 59.22 |
| AT1G59940.2 | Thale cress | golgi | 80.25 | 59.13 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 45.38 | 59.02 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 45.38 | 58.7 |
| CDY70164 | Canola | nucleus | 44.96 | 58.47 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 44.96 | 58.47 |
| CDY36905 | Canola | nucleus | 44.96 | 58.47 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 53.78 | 57.92 |
| KRH45761 | Soybean | nucleus | 52.94 | 56.5 |
| PGSC0003DMT400058306 | Potato | nucleus | 58.82 | 56.45 |
| KRG99225 | Soybean | nucleus | 51.68 | 55.41 |
| Solyc05g006420.2.1 | Tomato | nucleus | 58.4 | 55.38 |
| CDY00336 | Canola | nucleus | 44.12 | 55.26 |
| CDX84366 | Canola | nucleus | 44.12 | 55.26 |
| KRH69443 | Soybean | nucleus | 55.04 | 54.58 |
| KRH74701 | Soybean | nucleus | 55.88 | 54.51 |
| CDY65526 | Canola | cytosol | 36.13 | 54.43 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 39.92 | 53.67 |
| CDX72141 | Canola | cytosol | 28.15 | 52.76 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 40.34 | 52.17 |
| CDY71200 | Canola | cytosol | 27.73 | 51.97 |
| CDY59626 | Canola | cytosol | 27.73 | 51.97 |
| CDX96681 | Canola | cytosol | 44.54 | 51.21 |
| CDX75990 | Canola | cytosol | 27.31 | 51.18 |
| CDY35445 | Canola | cytosol | 34.45 | 50.93 |
| CDY22469 | Canola | cytosol | 33.61 | 50.63 |
| CDX83788 | Canola | cytosol | 44.96 | 50.47 |
| CDX68161 | Canola | cytosol | 41.18 | 49.75 |
| CDY41014 | Canola | nucleus | 44.54 | 49.53 |
| CDY26701 | Canola | nucleus | 44.12 | 49.3 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 31.93 | 44.97 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 41.18 | 44.95 |
| CDX79942 | Canola | nucleus | 39.5 | 43.72 |
| CDY23856 | Canola | nucleus | 39.08 | 43.26 |
| CDY35419 | Canola | nucleus | 38.24 | 42.13 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 39.08 | 41.89 |
| CDY22518 | Canola | nucleus | 37.82 | 41.47 |
| CDY06934 | Canola | cytosol | 38.66 | 41.44 |
| CDX67674 | Canola | cytosol | 39.08 | 39.74 |
| CDY06142 | Canola | cytosol | 39.08 | 39.41 |
| CDX72077 | Canola | cytosol | 38.24 | 38.72 |
| CDX76036 | Canola | nucleus | 36.55 | 38.67 |
| CDY30966 | Canola | cytosol | 36.55 | 37.5 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078H231 | UniProt:A0A078H231 | EnsemblPlants:CDY30913 | ProteinID:CDY30913 |
| ProteinID:CDY30913.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00046453001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EEE60B | SEG:seg | : | : | : |
Description
BnaC09g14930DBnaC09g14930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H231]
Coordinates
chrLK032263:-:429294..430655
Molecular Weight (calculated)
26098.6 Da
IEP (calculated)
4.581
GRAVY (calculated)
-0.142
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKSS VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFREVPV VIMSSENVLT RIDRCLEEGA EDFLLKPVKL ADVKRLRTYL TRDVKVSDGN KPKVPEDLSR FSSLAMVTPP PPPPPSITSV
201: KSSSLEEIVS SSPPPSESSV SPVGSPIRPM EMRSPGLD
101: TGYELLKKIK ESTSFREVPV VIMSSENVLT RIDRCLEEGA EDFLLKPVKL ADVKRLRTYL TRDVKVSDGN KPKVPEDLSR FSSLAMVTPP PPPPPSITSV
201: KSSSLEEIVS SSPPPSESSV SPVGSPIRPM EMRSPGLD
001: MNFEFIFLYL FRLVRYFLLP PSQKRKKGTY RFVSLIVTWN KKIFCKRNEV ENDPPIKRFD IEEYNNENIK QSREELVAIS LFYLFISYSF LTMAKDGGVS
101: CLRRSEMIGI GIGELESPPL DSDQVHVLAV DDSLVDRIVI ERLLRITSCK VTAVDSGWRA LEFLGLDDDK AAVEFDRLKV DLIITDYCMP GMTGYELLKK
201: IKESTSFKEV PVVIMSSENV MTRIDRCLEE GAEDFLLKPV KLADVKRLRS YLTRDVKVAA EGNKRKLTTP PPPPPLSATS SMESSDSTVE SPLSMVDDED
301: SLTMSPESAT SLVDSPMRSP GLA
101: CLRRSEMIGI GIGELESPPL DSDQVHVLAV DDSLVDRIVI ERLLRITSCK VTAVDSGWRA LEFLGLDDDK AAVEFDRLKV DLIITDYCMP GMTGYELLKK
201: IKESTSFKEV PVVIMSSENV MTRIDRCLEE GAEDFLLKPV KLADVKRLRS YLTRDVKVAA EGNKRKLTTP PPPPPLSATS SMESSDSTVE SPLSMVDDED
301: SLTMSPESAT SLVDSPMRSP GLA
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.