Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014695.1-P | Field mustard | cytosol | 99.21 | 99.21 |
| CDY71200 | Canola | cytosol | 99.21 | 99.21 |
| CDY59626 | Canola | cytosol | 99.21 | 99.21 |
| CDX72141 | Canola | cytosol | 92.13 | 92.13 |
| AT3G56380.2 | Thale cress | cytosol, nucleus, plastid | 90.55 | 74.68 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 89.76 | 67.46 |
| CDY35445 | Canola | cytosol | 83.46 | 65.84 |
| CDY22469 | Canola | cytosol | 81.1 | 65.19 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 75.59 | 62.75 |
| KRH53721 | Soybean | cytosol | 64.57 | 60.29 |
| PGSC0003DMT400042922 | Potato | cytosol | 67.72 | 58.11 |
| Solyc06g048930.2.1 | Tomato | cytosol, nucleus, plastid | 67.72 | 58.11 |
| KRH64213 | Soybean | cytosol | 65.35 | 56.85 |
| PGSC0003DMT400070964 | Potato | cytosol, nucleus, plastid | 64.57 | 52.56 |
| Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 64.57 | 52.56 |
| CDY65526 | Canola | cytosol | 52.76 | 42.41 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 52.76 | 37.85 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 53.54 | 36.96 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 50.39 | 35.75 |
| CDY36905 | Canola | nucleus | 50.39 | 34.97 |
| CDY70164 | Canola | nucleus | 50.39 | 34.97 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 50.39 | 34.78 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 49.61 | 34.43 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 49.61 | 34.43 |
| CDX68161 | Canola | cytosol | 52.76 | 34.01 |
| CDX84366 | Canola | nucleus | 48.82 | 32.63 |
| CDY00336 | Canola | nucleus | 48.82 | 32.63 |
| CDX96681 | Canola | cytosol | 52.76 | 32.37 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 54.33 | 31.65 |
| CDX83788 | Canola | cytosol | 52.76 | 31.6 |
| CDY26701 | Canola | nucleus | 52.76 | 31.46 |
| CDY41014 | Canola | nucleus | 52.76 | 31.31 |
| CDY23856 | Canola | nucleus | 51.97 | 30.7 |
| CDX79942 | Canola | nucleus | 51.18 | 30.23 |
| CDY35419 | Canola | nucleus | 51.18 | 30.09 |
| CDY22518 | Canola | nucleus | 51.18 | 29.95 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 51.18 | 29.28 |
| CDY06934 | Canola | cytosol | 50.39 | 28.83 |
| CDX67674 | Canola | cytosol | 52.76 | 28.63 |
| CDY45155 | Canola | nucleus | 51.18 | 28.51 |
| CDX76036 | Canola | nucleus | 50.39 | 28.44 |
| CDY06142 | Canola | cytosol | 51.18 | 27.54 |
| CDY30913 | Canola | nucleus | 51.18 | 27.31 |
| CDX72077 | Canola | cytosol | 50.39 | 27.23 |
| CDY30966 | Canola | cytosol | 49.61 | 27.16 |
| CDY20630 | Canola | nucleus | 51.18 | 26.32 |
| CDY37975 | Canola | nucleus | 51.18 | 25.69 |
| CDY20948 | Canola | nucleus | 51.18 | 25.69 |
| CDX93424 | Canola | nucleus | 51.18 | 25.69 |
| CDY34890 | Canola | nucleus | 51.97 | 25.38 |
| CDY66046 | Canola | nucleus | 50.39 | 25.3 |
| CDY07801 | Canola | nucleus | 51.97 | 24.91 |
Protein Annotations
| EnsemblPlants:CDX75990 | EnsemblPlantsGene:GSBRNA2T00126202001 | Gene3D:3.40.50.2300 | GO:A0A078CGL8 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF2 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX75990 | ProteinID:CDX75990.1 |
| SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EDE143 | MapMan:11.4.2.5 | : | : |
Description
BnaA04g02540D
Coordinates
chrLK031806:+:59943..60722
Molecular Weight (calculated)
14048.2 Da
IEP (calculated)
4.879
GRAVY (calculated)
-0.055
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEELHVLAV DDNLIDLTTA ENGLRALEYL GLGNPQQTES LTTNSVMKVN LIITDYCMPG MTGFELLKIV KQESSNLKEV PVVILSSENI PTRINKCLAS
101: GAQMFMQKPL KLSDVEKLKG HVLNCRS
101: GAQMFMQKPL KLSDVEKLKG HVLNCRS
001: MNSSGGSCSS LMDVVAYDHH LHHGHDEELH VLAVDDNLID RKLVERLLKI SCCKVTTAEN ALRALEYLGL GDQNQHIDAL TCNVMKVSLI ITDYCMPGMT
101: GFELLKKVKE SSNLREVPVV IMSSENIPTR INKCLASGAQ MFMQKPLKLA DVEKLKCHLM NCRS
101: GFELLKKVKE SSNLREVPVV IMSSENIPTR INKCLASGAQ MFMQKPLKLA DVEKLKCHLM NCRS
Arabidopsis Description
ARR16Response regulator 16 [Source:UniProtKB/TrEMBL;Acc:F4II22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.