Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 98.08 | 98.08 |
| PGSC0003DMT400042922 | Potato | cytosol | 78.21 | 82.43 |
| KRH53721 | Soybean | cytosol | 64.74 | 74.26 |
| KRH64213 | Soybean | cytosol | 67.95 | 72.6 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 66.03 | 67.32 |
| CDX72141 | Canola | cytosol | 53.21 | 65.35 |
| AT3G56380.2 | Thale cress | cytosol, nucleus, plastid | 64.1 | 64.94 |
| CDY59626 | Canola | cytosol | 52.56 | 64.57 |
| CDY71200 | Canola | cytosol | 52.56 | 64.57 |
| CDX75990 | Canola | cytosol | 52.56 | 64.57 |
| Bra014695.1-P | Field mustard | cytosol | 52.56 | 64.57 |
| CDY35445 | Canola | cytosol | 64.1 | 62.11 |
| Bra000199.1-P | Field mustard | cytosol | 64.1 | 62.11 |
| CDY22469 | Canola | cytosol | 62.82 | 62.03 |
| AT2G40670.2 | Thale cress | cytosol | 62.18 | 58.79 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 60.9 | 56.21 |
| Bra007242.1-P | Field mustard | cytosol, nucleus, plastid | 60.9 | 56.21 |
| PGSC0003DMT400007977 | Potato | nucleus | 47.44 | 45.4 |
| PGSC0003DMT400063187 | Potato | cytosol | 54.49 | 42.5 |
| PGSC0003DMT400007618 | Potato | nucleus | 50.0 | 36.45 |
| PGSC0003DMT400076758 | Potato | nucleus | 50.64 | 34.96 |
| PGSC0003DMT400076726 | Potato | nucleus | 49.36 | 34.07 |
| PGSC0003DMT400058306 | Potato | nucleus | 52.56 | 33.06 |
Protein Annotations
| EntrezGene:102583233 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | UniProt:M1CN14 | PFAM:PF00072 | EnsemblPlantsGene:PGSC0003DMG400027597 | PGSC:PGSC0003DMG400027597 | EnsemblPlants:PGSC0003DMT400070964 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF2 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| UniParc:UPI000295CBB7 | RefSeq:XP_006357298.1 | : | : | : | : |
Description
Type-a response regulator [Source:PGSC_GENE;Acc:PGSC0003DMG400027597]
Coordinates
chr6:+:34954419..34956541
Molecular Weight (calculated)
17247.1 Da
IEP (calculated)
5.712
GRAVY (calculated)
-0.160
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMFANSSSI SKGMGEVVAS DEPHVLAVDD NLVDRKLVEI LLKKSSCKVT TAEDGLRALE YLGLAAHQDS SANSNGSKVN MIITDYCMPG MTGYELLKKI
101: KESSMMKDVP VVIMSSENIP TRINQCMEEG AQIFMLKPLK HSDVERLRCQ IMQCRG
101: KESSMMKDVP VVIMSSENIP TRINQCMEEG AQIFMLKPLK HSDVERLRCQ IMQCRG
001: MNKGCGSGSD SCLSSMEEEL HVLAVDDNLI DRKLVERILK ISSCKVTTAE NGLRALEYLG LGDPQQTDSL TNVMKVNLII TDYCMPGMTG FELLKKVKES
101: SNLKEVPVVI LSSENIPTRI NKCLASGAQM FMQKPLKLSD VEKLKCHLLN CRS
101: SNLKEVPVVI LSSENIPTRI NKCLASGAQM FMQKPLKLSD VEKLKCHLLN CRS
Arabidopsis Description
ARR17Response regulator 17 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQB0]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.