Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72141 | Canola | cytosol | 77.27 | 93.7 |
| CDY71200 | Canola | cytosol | 75.32 | 91.34 |
| CDY59626 | Canola | cytosol | 75.32 | 91.34 |
| Bra014695.1-P | Field mustard | cytosol | 75.32 | 91.34 |
| CDX75990 | Canola | cytosol | 74.68 | 90.55 |
| AT2G40670.2 | Thale cress | cytosol | 83.77 | 78.18 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 85.71 | 78.11 |
| Bra007242.1-P | Field mustard | cytosol, nucleus, plastid | 85.71 | 78.11 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 71.43 | 71.9 |
| KRH53721 | Soybean | cytosol | 62.34 | 70.59 |
| Solyc06g048930.2.1 | Tomato | cytosol, nucleus, plastid | 67.53 | 70.27 |
| PGSC0003DMT400042922 | Potato | cytosol | 66.88 | 69.59 |
| KRH64213 | Soybean | cytosol | 64.29 | 67.81 |
| PGSC0003DMT400070964 | Potato | cytosol, nucleus, plastid | 64.94 | 64.1 |
| Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 64.94 | 64.1 |
| AT5G62920.1 | Thale cress | cytosol | 51.3 | 42.47 |
| AT3G48100.1 | Thale cress | cytosol | 49.35 | 41.3 |
| AT1G74890.1 | Thale cress | nucleus | 54.55 | 40.78 |
| AT1G19050.1 | Thale cress | cytosol | 52.6 | 39.32 |
| AT3G57040.1 | Thale cress | nucleus | 51.3 | 33.76 |
| AT2G41310.1 | Thale cress | nucleus | 48.7 | 33.33 |
| AT1G10470.1 | Thale cress | nucleus | 55.19 | 32.82 |
| AT1G59940.2 | Thale cress | golgi | 53.25 | 25.39 |
| AT2G07440.1 | Thale cress | cytosol | 19.48 | 22.06 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:824805 | UniProt:A0A1I9LQB0 | ProteinID:ANM64768.1 | Symbol:ARR17 |
| ArrayExpress:AT3G56380 | EnsemblPlantsGene:AT3G56380 | RefSeq:AT3G56380 | TAIR:AT3G56380 | RefSeq:AT3G56380-TAIR-G | EnsemblPlants:AT3G56380.2 |
| Unigene:At.5240 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | RefSeq:NP_001326774.1 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF2 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI000848C535 | SEG:seg | : | : | : |
Description
ARR17Response regulator 17 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQB0]
Coordinates
chr3:+:20905264..20906397
Molecular Weight (calculated)
16991.9 Da
IEP (calculated)
7.178
GRAVY (calculated)
-0.123
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKGCGSGSD SCLSSMEEEL HVLAVDDNLI DRKLVERILK ISSCKVTTAE NGLRALEYLG LGDPQQTDSL TNVMKVNLII TDYCMPGMTG FELLKKVKQE
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.