Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71200 | Canola | cytosol | 92.91 | 92.91 |
| CDY59626 | Canola | cytosol | 92.91 | 92.91 |
| CDX75990 | Canola | cytosol | 92.13 | 92.13 |
| AT3G56380.2 | Thale cress | cytosol, nucleus, plastid | 93.7 | 77.27 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 95.28 | 71.6 |
| CDY35445 | Canola | cytosol | 88.19 | 69.57 |
| CDY22469 | Canola | cytosol | 85.83 | 68.99 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 76.38 | 63.4 |
| KRH53721 | Soybean | cytosol | 66.14 | 61.76 |
| Solyc06g048930.2.1 | Tomato | cytosol, nucleus, plastid | 69.29 | 59.46 |
| PGSC0003DMT400042922 | Potato | cytosol | 69.29 | 59.46 |
| KRH64213 | Soybean | cytosol | 66.93 | 58.22 |
| Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 65.35 | 53.21 |
| PGSC0003DMT400070964 | Potato | cytosol, nucleus, plastid | 65.35 | 53.21 |
| CDY65526 | Canola | cytosol | 51.97 | 41.77 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 53.54 | 38.42 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 54.33 | 37.5 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 51.97 | 36.87 |
| CDY36905 | Canola | nucleus | 51.97 | 36.07 |
| CDY70164 | Canola | nucleus | 51.97 | 36.07 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 51.97 | 35.87 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 51.18 | 35.52 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 51.18 | 35.52 |
| CDX68161 | Canola | cytosol | 53.54 | 34.52 |
| CDX84366 | Canola | nucleus | 50.39 | 33.68 |
| CDY00336 | Canola | nucleus | 50.39 | 33.68 |
| CDX96681 | Canola | cytosol | 53.54 | 32.85 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 55.12 | 32.11 |
| CDX83788 | Canola | cytosol | 53.54 | 32.08 |
| CDY26701 | Canola | nucleus | 53.54 | 31.92 |
| CDY41014 | Canola | nucleus | 53.54 | 31.78 |
| CDY23856 | Canola | nucleus | 51.18 | 30.23 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 52.76 | 30.18 |
| CDX79942 | Canola | nucleus | 50.39 | 29.77 |
| CDY06934 | Canola | cytosol | 51.97 | 29.73 |
| CDY35419 | Canola | nucleus | 50.39 | 29.63 |
| CDY22518 | Canola | nucleus | 50.39 | 29.49 |
| CDY45155 | Canola | nucleus | 52.76 | 29.39 |
| CDX67674 | Canola | cytosol | 51.97 | 28.21 |
| CDY30913 | Canola | nucleus | 52.76 | 28.15 |
| CDX76036 | Canola | nucleus | 49.61 | 28.0 |
| CDY06142 | Canola | cytosol | 51.18 | 27.54 |
| CDX72077 | Canola | cytosol | 50.39 | 27.23 |
| CDY20630 | Canola | nucleus | 52.76 | 27.13 |
| CDY30966 | Canola | cytosol | 48.82 | 26.72 |
| CDY37975 | Canola | nucleus | 52.76 | 26.48 |
| CDY20948 | Canola | nucleus | 52.76 | 26.48 |
| CDX93424 | Canola | nucleus | 52.76 | 26.48 |
| CDY34890 | Canola | nucleus | 53.54 | 26.15 |
| CDY66046 | Canola | nucleus | 51.97 | 26.09 |
| CDY07801 | Canola | nucleus | 53.54 | 25.66 |
Protein Annotations
| EnsemblPlants:CDX72141 | EnsemblPlantsGene:GSBRNA2T00155962001 | Gene3D:3.40.50.2300 | GO:A0A078C541 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF2 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX72141 | ProteinID:CDX72141.1 |
| SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EC1FEF | MapMan:11.4.2.5 | : | : |
Description
BnaC08g27330D
Coordinates
chrLK031795:-:2644660..2645529
Molecular Weight (calculated)
14088.2 Da
IEP (calculated)
4.701
GRAVY (calculated)
-0.074
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEELHVLAV DDNLIDLTTA ENGIRALEYL GLGDPQQTDS PSTNNVIKVN LIITDYCMPG MTGFELLKIV KQESSNLKEV PVVILSSENI PTRINKCLAS
101: GAQMFMQKPL KLSDVEKLKC HLLNCRS
101: GAQMFMQKPL KLSDVEKLKC HLLNCRS
001: MNKGCGSGSD SCLSSMEEEL HVLAVDDNLI DRKLVERILK ISSCKVTTAE NGLRALEYLG LGDPQQTDSL TNVMKVNLII TDYCMPGMTG FELLKKVKQE
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS
101: SSNLKEVPVV ILSSENIPTR INKCLASGAQ MFMQKPLKLS DVEKLKCHLL NCRS
Arabidopsis Description
ARR17Response regulator 17 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQB0]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.