Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79942 | Canola | nucleus | 96.28 | 96.28 |
| Bra004615.1-P | Field mustard | nucleus | 95.35 | 95.79 |
| CDY35419 | Canola | nucleus | 85.12 | 84.72 |
| CDY22518 | Canola | nucleus | 84.65 | 83.87 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 85.58 | 82.88 |
| CDY06934 | Canola | cytosol | 83.72 | 81.08 |
| AT2G07440.1 | Thale cress | cytosol | 49.77 | 78.68 |
| CDY65526 | Canola | cytosol | 55.81 | 75.95 |
| CDX76036 | Canola | nucleus | 70.23 | 67.11 |
| CDY30966 | Canola | cytosol | 71.63 | 66.38 |
| CDX72077 | Canola | cytosol | 71.16 | 65.11 |
| CDX67674 | Canola | cytosol | 70.7 | 64.96 |
| CDY06142 | Canola | cytosol | 70.23 | 63.98 |
| PGSC0003DMT400076758 | Potato | nucleus | 63.26 | 60.18 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 60.93 | 60.09 |
| Solyc10g079600.1.1 | Tomato | nucleus | 62.79 | 59.47 |
| PGSC0003DMT400076726 | Potato | nucleus | 62.33 | 59.29 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 51.16 | 58.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.49 | 57.5 |
| Os12t0139400-01 | Rice | nucleus | 53.49 | 57.21 |
| GSMUA_Achr11P... | Banana | nucleus | 48.84 | 56.76 |
| PGSC0003DMT400007618 | Potato | nucleus | 56.28 | 56.54 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 50.7 | 56.48 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 36.74 | 56.03 |
| GSMUA_Achr11P... | Banana | nucleus | 46.98 | 55.8 |
| Os11t0143300-02 | Rice | cytosol | 53.49 | 55.29 |
| Solyc10g079700.1.1 | Tomato | nucleus | 61.4 | 55.23 |
| KRH66808 | Soybean | nucleus | 62.79 | 54.44 |
| KRG95133 | Soybean | nucleus | 61.4 | 53.66 |
| KXG27703 | Sorghum | nucleus | 49.3 | 52.48 |
| CDY71200 | Canola | cytosol | 30.7 | 51.97 |
| CDY59626 | Canola | cytosol | 30.7 | 51.97 |
| CDX75990 | Canola | cytosol | 30.7 | 51.97 |
| CDX72141 | Canola | cytosol | 30.23 | 51.18 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 42.33 | 50.84 |
| Os01t0952500-01 | Rice | cytosol | 54.42 | 50.43 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 42.33 | 49.73 |
| CDY70164 | Canola | nucleus | 42.33 | 49.73 |
| CDY36905 | Canola | nucleus | 42.33 | 49.73 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 42.33 | 49.46 |
| CDY22469 | Canola | cytosol | 36.28 | 49.37 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 41.86 | 49.18 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 52.56 | 48.92 |
| Zm00001d011849_P002 | Maize | cytosol | 52.56 | 48.5 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 52.09 | 48.28 |
| EES02064 | Sorghum | cytosol | 54.88 | 48.16 |
| CDY35445 | Canola | cytosol | 35.81 | 47.83 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 39.07 | 47.46 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 52.56 | 47.08 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 52.09 | 47.06 |
| CDY00336 | Canola | nucleus | 40.93 | 46.32 |
| CDX84366 | Canola | nucleus | 40.93 | 46.32 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 39.53 | 46.2 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 53.02 | 45.97 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 51.63 | 45.49 |
| CDX96681 | Canola | cytosol | 43.26 | 44.93 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 34.88 | 44.38 |
| Zm00001d023242_P001 | Maize | nucleus | 28.37 | 43.88 |
| CDX83788 | Canola | cytosol | 43.26 | 43.87 |
| CDY26701 | Canola | nucleus | 42.33 | 42.72 |
| CDX68161 | Canola | cytosol | 38.6 | 42.13 |
| CDY41014 | Canola | nucleus | 41.86 | 42.06 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 52.56 | 42.01 |
| Zm00001d052476_P001 | Maize | nucleus | 23.26 | 40.98 |
| CDY45155 | Canola | nucleus | 43.26 | 40.79 |
| CDY30913 | Canola | nucleus | 43.26 | 39.08 |
| CDY20630 | Canola | nucleus | 44.19 | 38.46 |
| CDY20948 | Canola | nucleus | 44.19 | 37.55 |
| KXG22820 | Sorghum | endoplasmic reticulum | 48.37 | 37.28 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 37.67 | 37.16 |
| CDY37975 | Canola | nucleus | 43.72 | 37.15 |
| CDY34890 | Canola | nucleus | 44.65 | 36.92 |
| CDX93424 | Canola | nucleus | 43.26 | 36.76 |
| CDY66046 | Canola | nucleus | 42.79 | 36.36 |
| CDY07801 | Canola | nucleus | 44.65 | 36.23 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 26.05 | 31.82 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078GEP6 | UniProt:A0A078GEP6 | EnsemblPlants:CDY23856 | ProteinID:CDY23856 |
| ProteinID:CDY23856.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00024279001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EDCACE | : | : | : | : |
Description
BnaC04g01810DBnaC04g01810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEP6]
Coordinates
chrLK032150:-:267785..269239
Molecular Weight (calculated)
24412.6 Da
IEP (calculated)
5.089
GRAVY (calculated)
-0.474
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMVRESQFH VLAVDDSHLD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RESNDQNALE THQQEVEINL IITDYCMPGM TGYDLLKKVK ESVAFRSIPV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVKL ADVTKLKPHM MKTKLKKEGE KPSEEENATL KPEESLVVEM ILPLNQELEL EQKEPMLSSN KRKAMEEVIS
201: ADRSRPKYND ITTSV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVKL ADVTKLKPHM MKTKLKKEGE KPSEEENATL KPEESLVVEM ILPLNQELEL EQKEPMLSSN KRKAMEEVIS
201: ADRSRPKYND ITTSV
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.