Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 52.48 | 60.16 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 56.03 | 54.11 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 51.77 | 52.14 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 86.52 | 50.83 |
| CDY65526 | Canola | cytosol | 54.61 | 48.73 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 83.69 | 47.58 |
| PGSC0003DMT400007977 | Potato | nucleus | 53.9 | 46.63 |
| Solyc02g071220.2.1 | Tomato | nucleus | 53.9 | 45.78 |
| GSMUA_Achr11P... | Banana | nucleus | 59.57 | 45.41 |
| Os01t0952500-01 | Rice | cytosol | 74.47 | 45.26 |
| TraesCS2B01G394900.1 | Wheat | cytosol | 42.55 | 44.44 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 82.98 | 43.49 |
| Zm00001d011849_P002 | Maize | cytosol | 71.63 | 43.35 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 49.65 | 42.94 |
| EES02064 | Sorghum | cytosol | 74.47 | 42.86 |
| GSMUA_Achr11P... | Banana | nucleus | 53.9 | 41.99 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 57.45 | 41.97 |
| TraesCS6B01G259700.1 | Wheat | plastid | 42.55 | 41.96 |
| KRH20737 | Soybean | nucleus | 53.19 | 41.9 |
| KRH30056 | Soybean | nucleus | 55.32 | 41.71 |
| KRH62857 | Soybean | nucleus | 54.61 | 41.62 |
| KRH13391 | Soybean | nucleus | 52.48 | 41.34 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 55.32 | 41.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 56.74 | 40.0 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 55.32 | 39.59 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 58.87 | 38.07 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 58.87 | 37.73 |
| CDX79942 | Canola | nucleus | 56.74 | 37.21 |
| Bra000224.1-P | Field mustard | nucleus | 56.74 | 37.04 |
| CDY35419 | Canola | nucleus | 56.74 | 37.04 |
| Bra004615.1-P | Field mustard | nucleus | 56.03 | 36.92 |
| CDY23856 | Canola | nucleus | 56.03 | 36.74 |
| TraesCS2B01G582300.1 | Wheat | cytosol | 43.97 | 36.05 |
| CDY22518 | Canola | nucleus | 55.32 | 35.94 |
| PGSC0003DMT400076726 | Potato | nucleus | 56.74 | 35.4 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 58.16 | 35.34 |
| Solyc10g079600.1.1 | Tomato | nucleus | 56.74 | 35.24 |
| Bra016943.1-P | Field mustard | cytosol | 55.32 | 35.14 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 55.32 | 35.14 |
| CDY06934 | Canola | cytosol | 55.32 | 35.14 |
| AT2G41310.1 | Thale cress | nucleus | 56.03 | 35.11 |
| AT3G57040.1 | Thale cress | nucleus | 58.16 | 35.04 |
| PGSC0003DMT400076758 | Potato | nucleus | 56.03 | 34.96 |
| CDX76036 | Canola | nucleus | 55.32 | 34.67 |
| PGSC0003DMT400007618 | Potato | nucleus | 52.48 | 34.58 |
| CDX72077 | Canola | cytosol | 57.45 | 34.47 |
| KRH66808 | Soybean | nucleus | 59.57 | 33.87 |
| Bra007295.1-P | Field mustard | cytosol | 56.03 | 33.47 |
| Bra003265.1-P | Field mustard | cytosol | 56.74 | 33.33 |
| Bra014649.1-P | Field mustard | nucleus | 55.32 | 33.33 |
| KRH18706 | Soybean | nucleus | 50.35 | 33.33 |
| CDX67674 | Canola | cytosol | 55.32 | 33.33 |
| CDY30966 | Canola | cytosol | 54.61 | 33.19 |
| CDY06142 | Canola | cytosol | 55.32 | 33.05 |
| KRG95133 | Soybean | nucleus | 57.45 | 32.93 |
| KRH64643 | Soybean | nucleus | 53.9 | 32.34 |
| KRH53261 | Soybean | nucleus | 53.19 | 32.33 |
| Solyc10g079700.1.1 | Tomato | nucleus | 54.61 | 32.22 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 52.48 | 31.9 |
| TraesCS2B01G326800.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.59 | 24.09 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 22.7 | 18.18 |
| AT2G07440.1 | Thale cress | cytosol | 14.89 | 15.44 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G178900.1 | EnsemblPlantsGene:TraesCS4B01G178900 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF31 | PFAM:PF00072 | PFscan:PS50110 | SEG:seg | SMART:SM00448 | SUPFAM:SSF52172 |
| TIGR:cd00156 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:392001561..392004068
Molecular Weight (calculated)
15357.3 Da
IEP (calculated)
5.661
GRAVY (calculated)
-0.218
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVDTETRF HVLAVDDGVI DRKLIEMLLR TSSYQVTTLD SGSKALEVLG LRDEGDSSSS SPPSSSAPDH HQEVGVNLII TDYCMPGMAG YDLLRRVKGS
101: SSLKDIPVVI MSSENVPARI SRRMPELTRR TPFCTSATTQ G
101: SSLKDIPVVI MSSENVPARI SRRMPELTRR TPFCTSATTQ G
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.