Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 87.67 | 91.43 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 72.6 | 86.18 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 80.14 | 71.78 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 91.1 | 67.51 |
| PGSC0003DMT400007977 | Potato | nucleus | 71.23 | 63.8 |
| Solyc02g071220.2.1 | Tomato | nucleus | 70.55 | 62.05 |
| KRH30056 | Soybean | nucleus | 78.77 | 61.5 |
| KRH62857 | Soybean | nucleus | 76.03 | 60.0 |
| KRH13391 | Soybean | nucleus | 73.29 | 59.78 |
| KRH20737 | Soybean | nucleus | 72.6 | 59.22 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 88.36 | 58.64 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 74.66 | 57.67 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 75.34 | 56.99 |
| GSMUA_Achr11P... | Banana | nucleus | 71.23 | 56.22 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 54.11 | 56.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 76.03 | 55.5 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 57.53 | 54.9 |
| GSMUA_Achr11P... | Banana | nucleus | 67.81 | 54.7 |
| Os12t0139400-01 | Rice | nucleus | 74.66 | 54.23 |
| KXG27703 | Sorghum | nucleus | 73.29 | 52.97 |
| Os11t0143300-02 | Rice | cytosol | 74.66 | 52.4 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 75.34 | 50.46 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 73.29 | 46.12 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 72.6 | 45.89 |
| Zm00001d023242_P001 | Maize | nucleus | 43.15 | 45.32 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 72.6 | 44.54 |
| Os01t0952500-01 | Rice | cytosol | 70.55 | 44.4 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 71.92 | 43.03 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 69.86 | 42.5 |
| Zm00001d011849_P002 | Maize | cytosol | 65.75 | 41.2 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 69.86 | 41.13 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 64.38 | 40.52 |
| EES02064 | Sorghum | cytosol | 67.81 | 40.41 |
| KXG22820 | Sorghum | endoplasmic reticulum | 75.34 | 39.43 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 59.59 | 39.37 |
| Zm00001d052476_P001 | Maize | nucleus | 32.88 | 39.34 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 69.18 | 37.55 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 58.22 | 32.95 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 33.56 | 27.84 |
Protein Annotations
| EntrezGene:100242967 | wikigene:100242967 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | ProteinID:CCB62288 | ProteinID:CCB62288.1 |
| InterPro:CheY-like_superfamily | UniProt:F6I5S0 | EMBL:FN596752 | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 |
| EntrezGene:LOC100242967 | wikigene:LOC100242967 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF5 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGR:TC54418 | UniParc:UPI00015CBD35 | ArrayExpress:VIT_13s0067g03490 |
| EnsemblPlantsGene:VIT_13s0067g03490 | EnsemblPlants:VIT_13s0067g03490.t01 | RefSeq:XP_002267932 | RefSeq:XP_002267932.1 | : | : |
Description
No Description!
Coordinates
chr13_random:-:1950698..1962866
Molecular Weight (calculated)
16422.8 Da
IEP (calculated)
4.848
GRAVY (calculated)
-0.214
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIAAETQFH VLAVDDSLID RKLIEKLLKT SSFQVTAVDS GSKALEFLGL QEEEQRNHHP QETEVNLIIT DYSMPGMTGY DLLRKIKESS SLKDIPVVIM
101: SSENIPSRIN RCLEEGAEDF FLKPVQLSDV NKLRPHLLGS RTLLEI
101: SSENIPSRIN RCLEEGAEDF FLKPVQLSDV NKLRPHLLGS RTLLEI
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.