Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 58.64 | 88.36 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 55.45 | 87.14 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 47.73 | 85.37 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 54.09 | 73.01 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 64.55 | 72.08 |
| KRH30056 | Soybean | nucleus | 58.64 | 68.98 |
| PGSC0003DMT400007977 | Potato | nucleus | 50.91 | 68.71 |
| KRH13391 | Soybean | nucleus | 55.0 | 67.6 |
| Solyc02g071220.2.1 | Tomato | nucleus | 50.45 | 66.87 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 57.27 | 66.67 |
| KRH20737 | Soybean | nucleus | 54.09 | 66.48 |
| KRH62857 | Soybean | nucleus | 55.45 | 65.95 |
| GSMUA_Achr11P... | Banana | nucleus | 55.0 | 65.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 59.09 | 65.0 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 64.09 | 64.68 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 55.0 | 62.69 |
| GSMUA_Achr11P... | Banana | nucleus | 49.55 | 60.22 |
| Os12t0139400-01 | Rice | nucleus | 54.55 | 59.7 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 37.73 | 58.87 |
| Os11t0143300-02 | Rice | cytosol | 54.55 | 57.69 |
| KXG27703 | Sorghum | nucleus | 51.36 | 55.94 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 37.73 | 54.25 |
| Os01t0952500-01 | Rice | cytosol | 54.55 | 51.72 |
| Zm00001d023242_P001 | Maize | nucleus | 31.36 | 49.64 |
| Zm00001d011849_P002 | Maize | cytosol | 51.82 | 48.93 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 50.91 | 48.48 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 52.73 | 48.33 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 50.45 | 47.84 |
| EES02064 | Sorghum | cytosol | 53.18 | 47.76 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 50.45 | 46.64 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 51.82 | 45.97 |
| Zm00001d052476_P001 | Maize | nucleus | 25.0 | 45.08 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 49.55 | 44.67 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 46.82 | 44.4 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 52.73 | 43.12 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 42.73 | 42.53 |
| KXG22820 | Sorghum | endoplasmic reticulum | 53.64 | 42.29 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 29.55 | 36.93 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 42.27 | 36.05 |
Protein Annotations
| EntrezGene:100253216 | wikigene:100253216 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | ProteinID:CCB62287 | ProteinID:CCB62287.1 |
| InterPro:CheY-like_superfamily | ncoils:Coil | UniProt:F6I5R9 | EMBL:FN596752 | GO:GO:0000160 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | EntrezGene:LOC100253216 | wikigene:LOC100253216 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGR:TC64231 | UniParc:UPI00015CBD31 |
| ArrayExpress:VIT_13s0067g03430 | EnsemblPlantsGene:VIT_13s0067g03430 | EnsemblPlants:VIT_13s0067g03430.t01 | unigene:Vvi.14927 | RefSeq:XP_002267404 | RefSeq:XP_002267404.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13_random:-:1922444..1923816
Molecular Weight (calculated)
25417.2 Da
IEP (calculated)
3.897
GRAVY (calculated)
-0.945
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMATEAQFH VLAVDDSIID RKLIEKLLKT SSYQVTAVDS GSKALEFLGL QEAEQRNLSP PSLCPSQEME VNLIITDYCM PGMTGYDLLR KIKESTSLKD
101: IPVVIMSSEN IPSRINRCLE EGAEDFFLKP VQLSDVNKLR PHLLKGKARE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EELSSNKRKN
201: VEESLSHDRT RARFNGLEVV
101: IPVVIMSSEN IPSRINRCLE EGAEDFFLKP VQLSDVNKLR PHLLKGKARE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EEEEEEEEEE EELSSNKRKN
201: VEESLSHDRT RARFNGLEVV
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.