Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 74.23 | 86.43 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 63.19 | 83.74 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 71.78 | 80.14 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 71.78 | 59.39 |
| PGSC0003DMT400007977 | Potato | nucleus | 58.28 | 58.28 |
| Solyc02g071220.2.1 | Tomato | nucleus | 57.67 | 56.63 |
| KRH13391 | Soybean | nucleus | 61.96 | 56.42 |
| KRH62857 | Soybean | nucleus | 63.8 | 56.22 |
| KRH30056 | Soybean | nucleus | 64.42 | 56.15 |
| KRH20737 | Soybean | nucleus | 61.35 | 55.87 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 73.01 | 54.09 |
| GSMUA_Achr11P... | Banana | nucleus | 58.9 | 51.89 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 60.12 | 51.85 |
| GSMUA_Achr11P... | Banana | nucleus | 57.06 | 51.38 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 47.85 | 50.98 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 59.51 | 50.26 |
| Os12t0139400-01 | Rice | nucleus | 61.96 | 50.25 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 42.94 | 49.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.74 | 49.5 |
| KXG27703 | Sorghum | nucleus | 60.74 | 49.01 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 65.03 | 48.62 |
| Os11t0143300-02 | Rice | cytosol | 61.96 | 48.56 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 58.9 | 41.38 |
| Os01t0952500-01 | Rice | cytosol | 58.28 | 40.95 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 57.67 | 40.69 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 58.28 | 39.92 |
| Zm00001d023242_P001 | Maize | nucleus | 33.74 | 39.57 |
| Zm00001d011849_P002 | Maize | cytosol | 55.83 | 39.06 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 57.67 | 38.52 |
| EES02064 | Sorghum | cytosol | 57.67 | 38.37 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 55.21 | 37.5 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 56.44 | 37.1 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 52.76 | 37.07 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 49.08 | 36.2 |
| KXG22820 | Sorghum | endoplasmic reticulum | 61.35 | 35.84 |
| Zm00001d052476_P001 | Maize | nucleus | 25.77 | 34.43 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 55.21 | 33.46 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 50.31 | 31.78 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 28.83 | 26.7 |
Protein Annotations
| EntrezGene:100251576 | wikigene:100251576 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | ProteinID:CBI40159 | ProteinID:CBI40159.3 |
| InterPro:CheY-like_superfamily | UniProt:D7UBP4 | EMBL:FN596752 | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 |
| EntrezGene:LOC100251576 | wikigene:LOC100251576 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF5 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001BE52CD | ArrayExpress:VIT_13s0067g03460 | EnsemblPlantsGene:VIT_13s0067g03460 |
| EnsemblPlants:VIT_13s0067g03460.t01 | RefSeq:XP_002266250 | RefSeq:XP_002266250.1 | : | : | : |
Description
No Description!
Coordinates
chr13_random:-:1937452..1943453
Molecular Weight (calculated)
18234.2 Da
IEP (calculated)
9.172
GRAVY (calculated)
-0.142
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAGESQFH VLAVDDSIID RKWIEKLLKT SSFQVTVVGS VSKALEFLGL QKAEQRNHHQ GTKVNLIITY YSMPGMTGYD LLKKIKESTS LKGIPVVIMS
101: SENIPSRINR CLEGEKDFFL KPVQLSDVNK LRPHLLGWRT LVDVEVSQGS YTNSTIFCCG KTP
101: SENIPSRINR CLEGEKDFFL KPVQLSDVNK LRPHLLGWRT LVDVEVSQGS YTNSTIFCCG KTP
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.