Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G108540.2 | Barley | nucleus | 90.83 | 87.9 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 50.83 | 86.52 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 86.25 | 76.95 |
| Os01t0952500-01 | Rice | cytosol | 72.5 | 75.0 |
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 36.25 | 70.73 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 42.5 | 69.86 |
| VIT_13s0067g03450.t01 | Wine grape | cytosol | 39.58 | 67.86 |
| Zm00001d011849_P002 | Maize | cytosol | 65.83 | 67.81 |
| EES02064 | Sorghum | cytosol | 68.75 | 67.35 |
| PGSC0003DMT400007977 | Potato | nucleus | 44.58 | 65.64 |
| Solyc02g071220.2.1 | Tomato | nucleus | 45.0 | 65.06 |
| CDY65526 | Canola | cytosol | 42.08 | 63.92 |
| GSMUA_Achr11P... | Banana | nucleus | 47.5 | 61.62 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 46.67 | 59.26 |
| KRH13391 | Soybean | nucleus | 44.17 | 59.22 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 47.08 | 58.55 |
| KRH20737 | Soybean | nucleus | 43.33 | 58.1 |
| TraesCS2B01G394900.1 | Wheat | cytosol | 32.5 | 57.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.92 | 57.5 |
| GSMUA_Achr11P... | Banana | nucleus | 42.92 | 56.91 |
| KRH30056 | Soybean | nucleus | 44.17 | 56.68 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 37.5 | 55.21 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 49.17 | 54.13 |
| KRH62857 | Soybean | nucleus | 41.67 | 54.05 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 44.17 | 53.81 |
| CDY35419 | Canola | nucleus | 47.92 | 53.24 |
| Bra000224.1-P | Field mustard | nucleus | 47.92 | 53.24 |
| CDX79942 | Canola | nucleus | 47.5 | 53.02 |
| CDY22518 | Canola | nucleus | 47.92 | 53.0 |
| Bra004615.1-P | Field mustard | nucleus | 47.08 | 52.8 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 48.33 | 52.73 |
| CDY23856 | Canola | nucleus | 47.08 | 52.56 |
| TraesCS6B01G259700.1 | Wheat | plastid | 30.83 | 51.75 |
| KRH66808 | Soybean | nucleus | 52.5 | 50.81 |
| AT2G41310.1 | Thale cress | nucleus | 47.5 | 50.67 |
| Bra016943.1-P | Field mustard | cytosol | 46.25 | 50.0 |
| KRG95133 | Soybean | nucleus | 51.25 | 50.0 |
| PGSC0003DMT400076758 | Potato | nucleus | 47.08 | 50.0 |
| CDY06934 | Canola | cytosol | 46.25 | 50.0 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 46.25 | 50.0 |
| Solyc10g079600.1.1 | Tomato | nucleus | 46.67 | 49.34 |
| PGSC0003DMT400076726 | Potato | nucleus | 46.25 | 49.12 |
| AT3G57040.1 | Thale cress | nucleus | 47.5 | 48.72 |
| CDX72077 | Canola | cytosol | 47.5 | 48.51 |
| PGSC0003DMT400007618 | Potato | nucleus | 42.92 | 48.13 |
| CDX76036 | Canola | nucleus | 45.0 | 48.0 |
| Bra007295.1-P | Field mustard | cytosol | 47.08 | 47.88 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 46.25 | 47.84 |
| CDY06142 | Canola | cytosol | 46.67 | 47.46 |
| Solyc10g079700.1.1 | Tomato | nucleus | 46.67 | 46.86 |
| CDX67674 | Canola | cytosol | 45.42 | 46.58 |
| Bra014649.1-P | Field mustard | nucleus | 45.0 | 46.15 |
| CDY30966 | Canola | cytosol | 44.17 | 45.69 |
| TraesCS2B01G582300.1 | Wheat | cytosol | 32.5 | 45.35 |
| Bra003265.1-P | Field mustard | cytosol | 45.0 | 45.0 |
| KRH18706 | Soybean | nucleus | 38.33 | 43.19 |
| KRH64643 | Soybean | nucleus | 41.67 | 42.55 |
| KRH53261 | Soybean | nucleus | 40.83 | 42.24 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 40.42 | 41.81 |
| AT2G07440.1 | Thale cress | cytosol | 21.25 | 37.5 |
| TraesCS2B01G326800.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 30.0 | 32.73 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 23.33 | 31.82 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G548600.1 | EnsemblPlantsGene:TraesCS3B01G548600 | Gene3D:3.40.50.2300 | GO:GO:0000160 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF31 | PFAM:PF00072 | PFscan:PS50110 | SEG:seg | SMART:SM00448 | SUPFAM:SSF52172 |
| TIGR:cd00156 | MapMan:11.4.2.5 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:784040396..784043212
Molecular Weight (calculated)
25899.6 Da
IEP (calculated)
5.175
GRAVY (calculated)
-0.556
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVVDAETRF HVLAVDDSVI DRKLIEMLLR TSSYQVTTVD SGSKALEVLG LRDEGDDSSS SSSPPSSSAP DHHQEVGVNL IITDYCMPGM TGYDLLRRVK
101: GSSSLKDIPV VIMSSENVPA RISRCLEDGA EEFFLKPVKL ADMKKLKSHL VRRKQPQLQP QTHEKPQPQP QQQQQKPQPE QQLKAEQAPA EPAAEEEAVT
201: AGGITGDCGG GSRKRKAAMM EQDGASTSLS SGSSGLAVET
101: GSSSLKDIPV VIMSSENVPA RISRCLEDGA EEFFLKPVKL ADMKKLKSHL VRRKQPQLQP QTHEKPQPQP QQQQQKPQPE QQLKAEQAPA EPAAEEEAVT
201: AGGITGDCGG GSRKRKAAMM EQDGASTSLS SGSSGLAVET
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.